Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 RNY3P10-201ENST00000384764 102 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 RPL36AP36-201ENST00000418616 301 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 USP9YP7-201ENST00000436723 430 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AL831737.1-201ENST00000441288 271 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AL590399.6-201ENST00000446396 307 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC002381.1-201ENST00000447049 280 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 USP9YP32-201ENST00000452432 430 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SNRPGP5-201ENST00000456003 220 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 OR9M1P-201ENST00000459641 921 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC146507.1-201ENST00000468335 354 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC022034.3-201ENST00000471393 478 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC093767.1-201ENST00000504523 156 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 RNA5SP164-201ENST00000516533 110 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AP006245.1-201ENST00000522549 120 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AP002748.2-201ENST00000528671 348 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AP002963.1-201ENST00000530590 184 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC068790.6-201ENST00000602558 258 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC078795.2-201ENST00000602835 1252 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC068276.1-201ENST00000605793 379 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC012360.2-201ENST00000609349 391 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 MIR6748-201ENST00000610433 71 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC104010.1-201ENST00000616889 150 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AL357080.1-201ENST00000617394 239 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC099842.1-201ENST00000619919 596 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC068792.1-201ENST00000621354 417 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 AC025048.6-202ENST00000627667 438 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 OR52H1-202ENST00000641796 1061 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 MTND4P4-201ENST00000439033 1366 ntBASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRTM1Q86UE6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 RNA5SP235-201ENST00000365411 114 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC025750.1-201ENST00000399891 379 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL355379.1-201ENST00000405542 640 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 CDK8P2-201ENST00000415020 547 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL356095.1-201ENST00000417217 199 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL158071.1-201ENST00000430315 461 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 MTCYBP45-201ENST00000435243 565 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 RSU1P2-202ENST00000437884 485 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC127537.2-201ENST00000439258 465 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL022238.1-201ENST00000442557 355 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC017015.1-201ENST00000477387 286 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AP000797.1-201ENST00000478870 387 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AL049830.2-201ENST00000480072 201 ntBASIC3.19□□□□□ -1.9
LRRTM1Q86UE6 AC012170.1-201ENST00000495139 359 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms