Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AL359999.1-201ENST00000604513 294 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 OR10AB1P-201ENST00000609613 938 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AL355472.4-201ENST00000610233 626 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC091834.1-201ENST00000614543 472 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AL590099.1-201ENST00000615276 138 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AL591424.2-201ENST00000617023 128 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC009159.1-201ENST00000618386 642 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 U7.8-201ENST00000619968 63 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC012150.2-201ENST00000621300 544 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC095031.1-201ENST00000623685 672 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC079597.1-201ENST00000624306 508 ntBASIC3.65□□□□□ -1.83
SHFQ7M4L6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.65□□□□□ -1.83
SHFQ7M4L6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHFQ7M4L6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 RNU6-259P-201ENST00000383999 107 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 U3.20-201ENST00000390909 217 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 Y_RNA.582-201ENST00000391023 95 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 CCNG1P1-201ENST00000406783 885 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 SPA17P1-201ENST00000416656 452 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL353777.1-201ENST00000425552 326 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC009961.2-201ENST00000435771 251 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC006011.1-201ENST00000442758 349 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC099563.1-201ENST00000456086 418 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 SNORD121B-201ENST00000458838 81 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 RNA5SP246-201ENST00000458909 119 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 S100A11P1-201ENST00000477525 312 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC013356.1-201ENST00000489027 564 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 RPL7P24-201ENST00000493052 752 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC008958.1-201ENST00000511047 682 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC017037.2-201ENST00000513850 890 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 DEFB109D-201ENST00000529497 240 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC123904.2-201ENST00000548059 300 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 TVP23BP1-201ENST00000557500 617 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC112230.1-201ENST00000604342 547 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL391813.2-201ENST00000609113 322 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AC091304.9-201ENST00000612091 226 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 U73479.1-201ENST00000618062 168 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 AL139089.1-201ENST00000620372 975 ntBASIC3.64□□□□□ -1.83
SHFQ7M4L6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHFQ7M4L6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 FRG1BP-201ENST00000278882 761 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 U8.3-201ENST00000363321 132 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 RNA5SP505-201ENST00000364748 108 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 RPS3AP36-201ENST00000398190 775 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 FCF1P10-201ENST00000407590 479 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 MIR1251-201ENST00000408552 70 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 RNU2-47P-201ENST00000410649 186 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 AC011933.1-201ENST00000413334 321 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 AL589872.1-201ENST00000426602 288 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 AL358472.1-201ENST00000431295 329 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 ATP5HP2-201ENST00000433885 485 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHFQ7M4L6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.63□□□□□ -1.83
SHFQ7M4L6 DNAJC19P4-201ENST00000440115 345 ntBASIC3.63□□□□□ -1.83
SHFQ7M4L6 AL049734.2-201ENST00000441066 616 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms