Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 RNU6-1085P-201ENST00000363576 107 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNA5SP505-201ENST00000364748 108 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNU6-730P-201ENST00000383954 104 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNU6-398P-201ENST00000384143 109 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL023807.1-201ENST00000407932 359 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNU6-908P-201ENST00000410160 94 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RN7SKP216-201ENST00000411050 312 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RPL21P111-201ENST00000418453 477 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL356387.2-201ENST00000422272 243 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL353777.1-201ENST00000425552 326 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL132765.1-201ENST00000434165 553 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 ARL2BPP10-201ENST00000446487 531 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 MTND1P12-201ENST00000455231 147 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 MTND1P11-201ENST00000456661 876 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 UBDP1-202ENST00000457888 382 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNU6-420P-201ENST00000458780 107 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC006463.2-201ENST00000473326 348 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC007182.2-201ENST00000489251 402 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC005726.1-201ENST00000494679 427 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 OR51K1P-201ENST00000510214 950 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNA5SP73-201ENST00000516744 108 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RNU6-714P-201ENST00000516963 103 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RN7SKP92-201ENST00000517266 244 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL512310.1-201ENST00000548639 172 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 MIR4330-201ENST00000579077 105 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 MIR3118-1-201ENST00000581787 76 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 UBE2V2P2-201ENST00000587677 504 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC234771.5-201ENST00000600161 514 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 BBIP1P1-201ENST00000602999 279 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AP001330.5-201ENST00000607176 411 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL138721.1-201ENST00000616756 179 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC009159.1-201ENST00000618386 642 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AC139792.3-201ENST00000623525 224 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 USP8P1-201ENST00000494673 3183 ntBASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA1Q6ZS62 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AC130650.2-201ENST00000618736 2403 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 RNU5E-1-201ENST00000362477 120 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 Y_RNA.160-201ENST00000363677 92 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 Y_RNA.573-201ENST00000384763 105 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 RPL23AP32-201ENST00000395315 459 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 RPS4XP9-201ENST00000405151 780 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AL356776.1-201ENST00000406574 447 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 SNORA11F-201ENST00000408237 128 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AL359704.1-201ENST00000411586 781 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 TMSB10P2-201ENST00000416049 131 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AC245028.1-201ENST00000423259 256 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 RPL7P28-201ENST00000437739 740 ntBASIC3.79□□□□□ -1.8
COLCA1Q6ZS62 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms