Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RNU1-100P-201ENST00000365255 165 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RNU6-650P-201ENST00000365658 111 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RNU6-761P-201ENST00000384148 107 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 UBA52P6-201ENST00000399822 382 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AL356057.2-201ENST00000403318 432 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RNA5SP21-201ENST00000410917 96 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AL645937.1-202ENST00000421799 937 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RNFT1P2-201ENST00000443064 757 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RSL24D1P3-201ENST00000449255 495 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RPL23AP23-201ENST00000452590 471 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RPL30P14-201ENST00000482744 348 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 RAC1P5-201ENST00000512182 576 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AC133963.2-201ENST00000513686 578 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AC100870.1-201ENST00000522035 505 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 NBEAP1-201ENST00000554452 979 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 SERPINE4P-201ENST00000554978 281 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 CYCSP39-201ENST00000565821 309 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 SNHG22-203ENST00000617833 660 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 TAB3P1-202ENST00000452645 1634 ntBASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMARCD3Q6STE5 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
SMARCD3Q6STE5 ZNF90P1-201ENST00000480493 1951 ntBASIC2.4□□□□□ -2.02
SMARCD3Q6STE5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AL512646.1-201ENST00000269395 1077 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 Y_RNA.110-201ENST00000363220 99 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 DSTNP4-201ENST00000399472 474 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 ATF1P1-201ENST00000406040 927 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 RNU2-72P-201ENST00000411175 163 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 VTA1P1-201ENST00000414044 866 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 HMGN2P30-201ENST00000423237 256 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 UBE2V1P6-201ENST00000430840 422 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AL512661.1-201ENST00000434586 1253 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC097499.1-201ENST00000444277 208 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 S100A11P2-201ENST00000467589 312 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 SRIP1-201ENST00000489235 288 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 MTND3P24-201ENST00000506306 329 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 HIGD1AP13-201ENST00000509878 289 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 C1DP5-201ENST00000525775 383 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC128657.1-201ENST00000549459 145 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC020895.1-201ENST00000595362 272 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC245036.5-201ENST00000596330 847 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC008687.2-201ENST00000597865 520 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 RPL21P136-201ENST00000605378 396 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC011374.2-201ENST00000607135 526 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AL158211.2-201ENST00000607282 395 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC140725.3-201ENST00000616193 880 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SMARCD3Q6STE5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AL512283.1-201ENST00000606756 1384 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 RNU6-792P-201ENST00000363490 107 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 MIR483-201ENST00000385070 76 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 SNORA40.4-201ENST00000390971 128 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 RNA5SP252-201ENST00000391131 119 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AL139095.1-201ENST00000404326 391 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 FAT1P1-201ENST00000406588 507 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 RNU4-27P-201ENST00000410889 139 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AL445183.3-201ENST00000414168 502 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC087499.2-201ENST00000432861 149 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 CYCSP32-201ENST00000440548 321 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 CACYBPP2-201ENST00000453625 678 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC126182.1-201ENST00000478134 357 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 SNORA76.2-201ENST00000517095 137 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms