Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RPS17P13-201ENST00000448974 407 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC098824.1-201ENST00000453565 980 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 SNORD121B-201ENST00000458838 81 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RPL32P34-201ENST00000486380 400 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 PCBP2P3-201ENST00000509726 843 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RNU6-1256P-201ENST00000516539 103 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AL845331.3-202ENST00000562856 261 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC074050.1-201ENST00000563247 211 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC022968.1-201ENST00000567372 442 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 MIR3609-201ENST00000582661 80 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC091057.2-201ENST00000602594 792 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AL161729.3-201ENST00000603533 673 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC067959.1-201ENST00000604334 379 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC090186.1-201ENST00000605991 572 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AP000484.1-201ENST00000620067 1252 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC091046.2-201ENST00000620775 665 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 RNU5E-8P-201ENST00000363502 116 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 RNU6-853P-201ENST00000364306 107 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 RNA5SP515-201ENST00000364570 118 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC006960.1-201ENST00000419980 153 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 PPP1R11P2-201ENST00000423543 382 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 COX6B1P7-201ENST00000430845 235 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 MTCO2P20-201ENST00000437339 673 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 VN1R105P-201ENST00000486595 910 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 GTF2IP9-201ENST00000502460 301 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC034159.1-201ENST00000513885 583 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 MTND1P8-201ENST00000571424 950 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC025627.2-201ENST00000576220 160 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AL353997.4-201ENST00000586196 166 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AL603758.1-201ENST00000618654 241 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 OR6C71P-202ENST00000641886 1107 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 MAPK10-322ENST00000641485 4530 ntBASIC3.37□□□□□ -1.87
C11orf88Q6PI97 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C11orf88Q6PI97 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 SNORA4.1-201ENST00000364263 144 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNU6-1027P-201ENST00000383998 107 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 MIR514A1-201ENST00000385133 98 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNU6-757P-201ENST00000410334 100 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNU6-516P-201ENST00000411381 104 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RPL30P2-201ENST00000414021 291 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC083875.1-201ENST00000419509 405 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 UBE2V1P13-201ENST00000436983 439 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 LSM1P1-201ENST00000438629 273 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC010099.1-201ENST00000455434 375 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNA5SP246-201ENST00000458909 119 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 snoU13.28-201ENST00000459235 104 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RPL21P129-201ENST00000491732 478 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms