Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 DUXAP10-204ENST00000612052 616 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL109620.1-201ENST00000618738 1197 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC009269.6-201ENST00000621778 588 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AC244258.1-201ENST00000637553 1071 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 AL392088.2-201ENST00000637607 285 ntBASIC3.07□□□□□ -1.92
NIPAL3Q6P499 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NIPAL3Q6P499 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RNU6-28P-201ENST00000362378 107 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RNU1-101P-201ENST00000391171 127 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 EI24P2-201ENST00000397776 1076 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 HMGB1P17-201ENST00000403495 628 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RNU2-43P-201ENST00000410306 190 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RNA5SP80-201ENST00000410475 111 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RNU6-1077P-201ENST00000410506 102 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 RPL23AP22-201ENST00000437556 453 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC007327.1-201ENST00000447461 264 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 PDSS1P2-201ENST00000449397 678 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC104308.1-201ENST00000454621 333 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 PTGES3P5-201ENST00000455109 434 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 MTND2P39-201ENST00000457230 764 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC108860.1-201ENST00000484521 383 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 MTND3P3-201ENST00000505004 126 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC114322.1-201ENST00000506771 926 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 TXNP6-201ENST00000510190 310 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 FAM60DP-201ENST00000524174 632 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC118273.1-201ENST00000525324 3006 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 VN1R78P-201ENST00000597393 564 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC006557.5-201ENST00000603126 811 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC004987.4-201ENST00000603383 338 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC009220.3-201ENST00000604318 586 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AC093908.1-201ENST00000623125 8092 ntBASIC3.06□□□□□ -1.92
NIPAL3Q6P499 AL079343.1-201ENST00000572358 1771 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RNA5SP383-201ENST00000362934 120 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RNA5SP50-201ENST00000363731 107 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 SNORD17-201ENST00000390930 237 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RPS3AP26-201ENST00000398259 784 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AL354719.1-201ENST00000406535 843 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RN7SKP27-201ENST00000410684 333 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 TIMM9P2-201ENST00000419324 266 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC024082.2-201ENST00000434771 238 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 NANOGP2-201ENST00000435391 727 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RPL36AP33-201ENST00000450395 310 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC103783.1-201ENST00000520506 373 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 MTCYBP23-201ENST00000558717 1102 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 MIR5186-201ENST00000577504 120 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC090615.1-201ENST00000577519 154 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC092354.2-201ENST00000607786 514 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AL596245.1-201ENST00000618994 362 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC231657.1-201ENST00000624313 397 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AL445984.1-201ENST00000637834 659 ntBASIC3.05□□□□□ -1.92
NIPAL3Q6P499 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms