Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.84□□□□□ -1.63
KRT40Q6A162 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT40Q6A162 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT40Q6A162 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT40Q6A162 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT40Q6A162 LARP1BP1-201ENST00000506036 1359 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.83□□□□□ -1.64
KRT40Q6A162 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRT40Q6A162 GNG5P1-201ENST00000255500 204 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 RPL23AP57-201ENST00000332361 466 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 Y_RNA.61-201ENST00000362835 102 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 Y_RNA.295-201ENST00000364918 102 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
KRT40Q6A162 MIR513A2-201ENST00000385249 127 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 DSTNP4-201ENST00000399472 474 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.83□□□□□ -1.64
KRT40Q6A162 RPS3AP9-201ENST00000417027 792 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC016831.2-201ENST00000417179 352 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 MTCO1P20-201ENST00000425366 358 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.83□□□□□ -1.64
KRT40Q6A162 RPL23AP16-201ENST00000441715 421 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 RPL17P49-201ENST00000443728 411 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC022431.1-201ENST00000450941 438 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.83□□□□□ -1.64
KRT40Q6A162 RPL7L1P8-201ENST00000469911 741 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC146944.2-203ENST00000502493 354 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC025554.1-201ENST00000505641 188 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT40Q6A162 AC139495.1-202ENST00000513164 354 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 RNU6-875P-201ENST00000516488 106 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 RN7SKP96-201ENST00000516948 297 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 HMGB1P19-201ENST00000517578 577 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC109635.3-201ENST00000529536 185 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT40Q6A162 AC069240.1-201ENST00000548774 375 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT40Q6A162 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT40Q6A162 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT40Q6A162 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT40Q6A162 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT40Q6A162 TPMTP1-201ENST00000592307 737 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 CKS1BP3-201ENST00000600888 237 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC112230.1-201ENST00000604342 547 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC011816.2-201ENST00000607089 556 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AL020991.1-201ENST00000612314 373 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC039056.2-201ENST00000622261 511 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC112484.5-201ENST00000624189 228 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 AC091905.1-201ENST00000624400 311 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT40Q6A162 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT40Q6A162 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.83□□□□□ -1.64
KRT40Q6A162 KPNA2P2-201ENST00000419546 1489 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KRT40Q6A162 Y_RNA.1-201ENST00000352915 104 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 RNU6-181P-201ENST00000363225 107 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 RPL7P25-201ENST00000404151 721 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 CRYBB2P1-203ENST00000415709 538 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AL356095.1-201ENST00000417217 199 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC245054.1-201ENST00000420944 258 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT40Q6A162 RPL31P35-201ENST00000431058 377 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 MTCO2P11-201ENST00000431069 680 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT40Q6A162 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC002381.1-201ENST00000447049 280 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AF213884.1-201ENST00000488102 463 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC114967.1-201ENST00000504890 259 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC024589.1-201ENST00000512207 263 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC018797.3-201ENST00000513388 1241 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AP000889.1-201ENST00000530968 660 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT40Q6A162 TVP23BP1-201ENST00000557500 617 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC008752.3-201ENST00000588113 712 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC060780.3-201ENST00000589464 80 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT40Q6A162 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC069200.1-201ENST00000609511 323 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT40Q6A162 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 AC091953.5-201ENST00000622919 233 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC099654.5-201ENST00000636479 350 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 LRRC77P-213ENST00000637727 880 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 MIR1321-201ENST00000637766 79 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT40Q6A162 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT40Q6A162 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms