Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 COX6CP13-201ENST00000428703 226 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL137792.2-201ENST00000443484 235 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 CEACAMP7-201ENST00000444105 496 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTCO3P10-201ENST00000455912 772 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC005008.1-201ENST00000456151 612 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL36AP13-201ENST00000457490 317 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 Y_RNA.653-201ENST00000459091 95 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC005532.2-201ENST00000467154 373 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC006967.1-201ENST00000467608 589 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC097484.1-201ENST00000471148 389 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RN7SL799P-201ENST00000475891 298 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPSAP50-201ENST00000481955 852 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RN7SL244P-201ENST00000493405 297 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 PTP4A1P4-201ENST00000512479 322 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-1092P-201ENST00000516955 87 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 Y_RNA.720-201ENST00000517166 92 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC022634.1-201ENST00000520765 532 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 DEFB108D-201ENST00000527787 222 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 OR5D15P-201ENST00000531671 942 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC018630.1-201ENST00000541376 925 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC006349.1-201ENST00000555526 235 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 MIR3691-201ENST00000578066 90 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC011447.4-201ENST00000587562 111 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AF038458.1-201ENST00000588406 262 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP000654.2-201ENST00000605633 586 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 EIF3FP1-201ENST00000613970 806 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC091925.1-201ENST00000623204 462 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP001784.1-201ENST00000624107 428 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC055839.1-201ENST00000634467 498 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL359922.3-201ENST00000624779 1670 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC125336.1-201ENST00000508893 2827 ntBASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQA1Q5Y7H0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC009229.4-201ENST00000623854 1947 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-82P-201ENST00000363970 107 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-960P-201ENST00000364056 120 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORA2.3-201ENST00000383920 135 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL30P2-201ENST00000414021 291 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC093162.1-201ENST00000419682 124 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 SKA2P1-201ENST00000425592 390 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL36AP6-201ENST00000435770 321 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC092647.2-201ENST00000452998 253 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTCYBP40-201ENST00000509390 1135 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RN7SKP277-201ENST00000516895 283 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-988P-201ENST00000519081 107 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 GSTP1P1-201ENST00000548078 319 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 HMGN2P6-201ENST00000551091 273 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 SETP7-201ENST00000552169 453 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 IMMP1LP2-201ENST00000552954 492 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 OR11H5P-201ENST00000554039 926 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 MIR5690-201ENST00000583739 73 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 OR7E18P-201ENST00000592589 702 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC006116.3-201ENST00000592968 361 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 RMST_9.1-201ENST00000619945 193 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL353662.3-201ENST00000625131 237 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms