Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 snoU13.4-201ENST00000458916 104 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RPL9P33-201ENST00000484311 566 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RNA5SP337-201ENST00000517007 109 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AP004242.1-201ENST00000533701 349 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC005832.2-201ENST00000538921 1430 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC087883.1-201ENST00000551882 391 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC006960.3-201ENST00000561845 705 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 MIR4737-201ENST00000583979 81 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ELOCP28-201ENST00000590044 317 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL139286.1-201ENST00000604465 483 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL022154.1-201ENST00000604698 785 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 MIR98-201ENST00000606724 119 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 MIR7155-201ENST00000615925 56 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC026585.1-201ENST00000619582 524 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL133412.1-201ENST00000380194 2992 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 SNORA31-201ENST00000362607 130 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 SNORA51.2-201ENST00000364595 132 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 SNORA20.2-201ENST00000383922 131 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 MIR105-2-201ENST00000385083 81 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC097374.1-203ENST00000400783 485 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 GSTA9P-201ENST00000406231 611 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AMD1P2-201ENST00000412936 992 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 RPS23P10-201ENST00000416185 486 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL358934.1-201ENST00000432346 324 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 RPS6P12-201ENST00000432491 726 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 OR2B8P-201ENST00000432841 938 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL162389.1-201ENST00000449233 177 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 SRRM1P2-201ENST00000464531 1192 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC068305.1-201ENST00000497406 726 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC025554.1-201ENST00000505641 188 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC010493.1-201ENST00000513479 292 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC114797.1-201ENST00000514003 728 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC011979.2-201ENST00000527568 352 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 PCNPP1-201ENST00000552501 511 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 MIR3167-201ENST00000579623 85 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AL031320.1-201ENST00000604177 357 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC012443.1-201ENST00000605605 231 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC073534.2-201ENST00000620377 381 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC091905.2-201ENST00000623143 306 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 AC138915.3-201ENST00000562908 1389 ntBASIC4.24□□□□□ -1.73
RNF220Q5VTB9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF220Q5VTB9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AC009812.4-201ENST00000569134 1805 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 RNU6-76P-201ENST00000384060 104 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 AL136372.1-201ENST00000403060 228 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 RNA5SP107-201ENST00000411358 122 ntBASIC4.23□□□□□ -1.73
RNF220Q5VTB9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF220Q5VTB9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms