Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MTND4P13-201ENST00000402078 1023 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC244505.4-201ENST00000434905 287 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 SSXP5-201ENST00000443473 287 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AL137847.3-201ENST00000611521 109 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 HMGB1P11-201ENST00000413899 637 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 SNORA31.11-201ENST00000516528 139 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC034268.2-201ENST00000571784 482 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 MFSD8-245ENST00000641743 948 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AL512283.1-201ENST00000606756 1384 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 RPL23AP76-201ENST00000441860 458 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 NDUFS5P3-201ENST00000450668 321 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 OR4P1P-201ENST00000530808 1136 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 AC034102.8-201ENST00000615146 484 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 MIR6779-201ENST00000617283 64 ntBASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
VPS13DQ5THJ4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 EI24P1-201ENST00000416584 867 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AL353597.2-202ENST00000434901 373 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 USP9YP7-201ENST00000436723 430 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 USP9YP32-201ENST00000452432 430 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC010265.1-201ENST00000513509 211 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AP005901.5-201ENST00000545779 1796 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC078918.1-201ENST00000498515 228 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 ATG10-AS1-201ENST00000504846 648 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC090071.1-201ENST00000507713 644 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 AC020895.1-201ENST00000595362 272 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 MIR6766-201ENST00000622641 72 ntBASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.34□□□□□ -2.19
VPS13DQ5THJ4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 AL591719.1-201ENST00000444669 744 ntBASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 AC091046.2-201ENST00000620775 665 ntBASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
VPS13DQ5THJ4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 HMGB1P13-201ENST00000406019 642 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 snoU13.18-201ENST00000459483 104 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC080013.2-201ENST00000460866 323 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 HIGD1AP10-201ENST00000527837 282 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AP001542.2-201ENST00000593141 364 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 RPP40P2-201ENST00000603596 712 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 Z73417.1-201ENST00000447373 778 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 RNU6-717P-201ENST00000459076 104 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 IGHV3-76-201ENST00000522465 295 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC107918.3-201ENST00000533272 382 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 LINC00216-201ENST00000623548 1126 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 MTND5P23-201ENST00000430812 1655 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC079804.2-201ENST00000490376 200 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC068339.2-201ENST00000534395 618 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 CBX3P4-201ENST00000538909 354 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 MIR3199-1-201ENST00000582434 88 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms