Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 AP000547.3-204ENST00000588548 2523 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 RNU6-263P-201ENST00000363811 107 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 U8.6-201ENST00000364939 135 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 SNORA40.19-201ENST00000390846 128 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 CFL1P1-202ENST00000432948 411 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 AC092967.1-201ENST00000449016 481 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 AC079354.2-201ENST00000453523 154 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 Z92846.1-201ENST00000456203 268 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 RPS26P21-201ENST00000475397 348 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 RPS29P24-201ENST00000486345 171 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 SNORD46.2-201ENST00000516021 102 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 RNA5SP434-201ENST00000516647 121 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 Y_RNA.706-201ENST00000516933 99 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 DEFB108D-201ENST00000527787 222 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 MIR8076-201ENST00000611401 83 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 AC024255.1-201ENST00000614376 102 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 MIR3658-201ENST00000636291 56 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 MTND5P35-201ENST00000557537 1720 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARS2Q5ST30 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.61□□□□□ -1.35
VARS2Q5ST30 AC024651.2-201ENST00000562480 2098 ntBASIC6.61□□□□□ -1.35
VARS2Q5ST30 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC069528.2-201ENST00000624849 1991 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 U3.35-201ENST00000408405 208 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 RNA5SP156-201ENST00000410250 110 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 RPL21P90-201ENST00000415692 466 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 BX510359.3-201ENST00000422168 306 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 MTND6P12-201ENST00000428247 522 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 RPL23AP33-201ENST00000442301 452 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 HLA-DPA3-207ENST00000454398 229 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC010683.1-201ENST00000473673 378 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC090049.2-201ENST00000550377 109 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 LRRC37A5P-203ENST00000580181 585 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC008749.1-201ENST00000597650 306 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 RPL23AP78-201ENST00000599928 470 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.6□□□□□ -1.35
VARS2Q5ST30 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARS2Q5ST30 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.6□□□□□ -1.35
VARS2Q5ST30 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms