Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC098826.1-201ENST00000433943 471 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL445687.1-201ENST00000439946 251 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 RSL24D1P3-201ENST00000449255 495 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC233279.1-201ENST00000455300 423 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 RPL31P53-201ENST00000457065 348 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC108120.2-201ENST00000512973 294 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AP003102.1-201ENST00000525638 661 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC022080.3-201ENST00000544433 482 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 MIR4325-201ENST00000583049 90 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 ZNF92P3-201ENST00000596594 954 ntBASIC2.19□□□□□ -2.06
CCDC58Q4VC31 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC58Q4VC31 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AL109809.4-201ENST00000603520 2185 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC105402.1-201ENST00000413336 545 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AL356320.2-201ENST00000417263 507 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 HSFY1P1-201ENST00000423928 1178 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 DPPA3P1-201ENST00000448050 469 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 SNRPGP6-201ENST00000451124 220 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC079600.2-201ENST00000550076 130 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC078814.3-201ENST00000553036 491 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 TRAV28-201ENST00000557548 323 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC009090.3-201ENST00000616553 565 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AC012640.5-201ENST00000623897 319 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 NSRP1P1-201ENST00000444067 1693 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
CCDC58Q4VC31 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AL513328.1-201ENST00000446460 224 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC078857.1-201ENST00000469870 667 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC021146.7-201ENST00000509604 775 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC112673.1-201ENST00000513168 575 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 OR5AK3P-201ENST00000527486 1297 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 OR4G1P-201ENST00000588632 938 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AL360181.4-201ENST00000621752 134 ntBASIC2.17□□□□□ -2.06
CCDC58Q4VC31 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC58Q4VC31 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 MTND4P35-201ENST00000604257 1375 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 SNORD114-30-201ENST00000364448 72 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 SNORA44-201ENST00000384584 132 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 RNU6-193P-201ENST00000410977 107 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AL158825.1-201ENST00000414735 521 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 SRIP2-201ENST00000428470 166 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC104389.3-201ENST00000445629 235 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 NANOGNBP1-201ENST00000448444 480 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 snoU13.22-201ENST00000459428 104 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 S100A11P2-201ENST00000467589 312 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC133963.2-201ENST00000513686 578 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC025755.1-201ENST00000521306 278 ntBASIC2.16□□□□□ -2.06
CCDC58Q4VC31 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC58Q4VC31 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms