Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AP000567.1-201ENST00000406413 156 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RNA5SP129-201ENST00000410276 118 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RNA5SP306-201ENST00000411087 107 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RPL17P12-201ENST00000413391 526 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC109780.2-201ENST00000413467 845 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC007742.1-201ENST00000425789 329 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 ELOCP26-201ENST00000436067 329 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 SRRM1P2-201ENST00000464531 1192 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AP000797.1-201ENST00000478870 387 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RPL35P6-201ENST00000490024 372 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC107401.1-201ENST00000503426 685 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AL592156.1-201ENST00000508758 304 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 MTND5P4-201ENST00000514978 288 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 SYF2P1-201ENST00000550658 413 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC087481.2-201ENST00000565492 330 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC091489.2-201ENST00000566263 604 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 RN7SL600P-201ENST00000581811 299 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC087241.4-201ENST00000612441 480 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 AC027514.1-201ENST00000588561 1603 ntBASIC4.7□□□□□ -1.66
LONRF3Q496Y0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.7□□□□□ -1.66
LONRF3Q496Y0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RNA5SP283-201ENST00000365604 119 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RNU2-47P-201ENST00000410649 186 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 TPMTP2-201ENST00000414372 726 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ELOCP17-201ENST00000414751 326 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC004552.1-201ENST00000419089 348 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RPS27AP14-201ENST00000422868 454 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 C8orf59P1-201ENST00000429930 303 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 COX6B1P7-201ENST00000430845 235 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 SNRPEP7-201ENST00000438350 220 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC091564.1-201ENST00000464563 479 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RPS26P3-201ENST00000470205 348 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC090543.2-201ENST00000483963 348 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC004057.1-201ENST00000485827 348 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC025445.1-201ENST00000502728 300 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 MLLT10P2-201ENST00000506434 249 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 HMGB3P15-201ENST00000507326 574 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 MIR2116-201ENST00000517221 80 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 BNIP3P5-201ENST00000562290 498 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC009101.1-201ENST00000568135 242 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC090615.1-201ENST00000577519 154 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AC103710.4-201ENST00000609301 899 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 FAM27D1-201ENST00000612308 341 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 AL357080.1-201ENST00000617394 239 ntBASIC4.69□□□□□ -1.66
LONRF3Q496Y0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms