Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX6-1P78426 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX6-1P78426 RNU6-1220P-201ENST00000517126 108 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 AC134698.4-201ENST00000523451 826 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX6-1P78426 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX6-1P78426 GLUD1P4-201ENST00000590914 418 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 SNRPGP15-201ENST00000600149 222 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 AC008536.2-201ENST00000607284 349 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 TUG1_2.1-201ENST00000614234 87 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 AL450472.3-201ENST00000615578 367 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 BX005214.3-202ENST00000619809 325 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.22□□□□□ -1.73
NKX6-1P78426 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX6-1P78426 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NKX6-1P78426 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX6-1P78426 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX6-1P78426 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX6-1P78426 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX6-1P78426 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX6-1P78426 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX6-1P78426 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
NKX6-1P78426 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
NKX6-1P78426 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.21□□□□□ -1.73
NKX6-1P78426 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
NKX6-1P78426 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.21□□□□□ -1.73
NKX6-1P78426 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NKX6-1P78426 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 RNU1-39P-201ENST00000383897 165 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 MIR23A-201ENST00000385245 73 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL357515.1-201ENST00000402967 542 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 MIR1193-201ENST00000408109 78 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NKX6-1P78426 TBCAP2-201ENST00000416175 326 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 EI24P1-201ENST00000416584 867 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 SSXP9-201ENST00000417503 292 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 BX510359.2-201ENST00000417920 305 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX6-1P78426 RBMX2P4-201ENST00000441256 376 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 ARL2BPP10-201ENST00000446487 531 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AL162389.1-201ENST00000449233 177 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AC006480.1-201ENST00000449887 378 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 PRDX4P1-201ENST00000507189 574 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX6-1P78426 RN7SKP122-201ENST00000515923 296 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 SCARNA24.1-201ENST00000516465 137 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 RPL23AP53-201ENST00000521854 457 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AC123904.3-201ENST00000547218 814 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AC125611.2-201ENST00000551907 647 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 RN7SL176P-201ENST00000580352 264 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 MIR4715-201ENST00000584117 79 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 RPL12P25-202ENST00000598100 674 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AC067959.1-201ENST00000604334 379 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL022099.1-201ENST00000604551 712 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AP001330.5-201ENST00000607176 411 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AC104458.1-201ENST00000608243 463 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 AC068831.8-201ENST00000620171 435 ntBASIC4.21□□□□□ -1.74
NKX6-1P78426 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX6-1P78426 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX6-1P78426 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NKX6-1P78426 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX6-1P78426 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 Y_RNA.256-201ENST00000364594 104 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 RNU6-1181P-201ENST00000384191 106 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 RNU6-780P-201ENST00000391030 104 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC114755.2-201ENST00000413520 361 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 MTCO1P20-201ENST00000425366 358 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 RPL23AP30-201ENST00000432419 501 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 RPS20P5-201ENST00000434808 360 ntBASIC4.2□□□□□ -1.74
NKX6-1P78426 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX6-1P78426 AC008481.1-201ENST00000463278 396 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms