Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR10AB1P-201ENST00000609613 938 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AL355472.4-201ENST00000610233 626 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC138749.5-201ENST00000611461 208 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 MLECP1-201ENST00000615893 709 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC116165.2-201ENST00000616705 206 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC092140.2-201ENST00000618027 521 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 AL445567.2-201ENST00000618935 498 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AL713922.2-201ENST00000619384 716 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 MIR8059-201ENST00000620427 81 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC112204.3-201ENST00000623822 332 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC004777.1-201ENST00000624317 287 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AP005264.7-201ENST00000625003 745 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC090582.1-201ENST00000636321 199 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 BDP1P-201ENST00000582658 1990 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CL1P78423 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CL1P78423 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CL1P78423 MIR141-201ENST00000384975 95 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 SNORD115.1-201ENST00000391109 76 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 USP9YP13-201ENST00000417797 480 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 DUTP6-201ENST00000425573 462 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 RPL21P66-201ENST00000426566 466 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 VN1R108P-201ENST00000431580 830 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 ATP5HP2-201ENST00000433885 485 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AL049734.2-201ENST00000441066 616 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 USP9YP29-201ENST00000445112 563 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 RAC1P7-201ENST00000445367 377 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AL592447.1-201ENST00000447592 540 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 SNRPFP4-201ENST00000456366 242 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 RPL36AP13-201ENST00000457490 317 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC010618.1-201ENST00000469924 477 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 TMED11P-201ENST00000479478 690 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 RPS27AP13-201ENST00000498403 237 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC020593.1-201ENST00000507399 299 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CL1P78423 NPM1P41-201ENST00000512920 831 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AC026801.2-201ENST00000515352 425 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 RNU6-201P-201ENST00000517100 61 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 NARSP2-201ENST00000518524 679 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CL1P78423 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AP000907.2-201ENST00000530827 353 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CL1P78423 CYCSP29-201ENST00000533731 318 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CL1P78423 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CL1P78423 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 RPL23AP87-202ENST00000573039 466 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 FAM60BP-201ENST00000578364 658 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CL1P78423 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.28□□□□□ -1.88
CX3CL1P78423 AC064872.1-201ENST00000604823 1072 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC108747.1-201ENST00000609508 535 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.28□□□□□ -1.88
CX3CL1P78423 uc_338.32-201ENST00000615087 172 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC009159.1-201ENST00000618386 642 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AL590240.3-201ENST00000621416 943 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC009878.1-201ENST00000621819 340 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AL603839.4-201ENST00000624658 1005 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC244258.1-201ENST00000637553 1071 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 AC099654.13-201ENST00000639774 207 ntBASIC3.28□□□□□ -1.88
CX3CL1P78423 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.28□□□□□ -1.88
CX3CL1P78423 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CL1P78423 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CX3CL1P78423 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.28□□□□□ -1.89
CX3CL1P78423 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CX3CL1P78423 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CX3CL1P78423 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 AC126755.2-208ENST00000327792 462 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC007685.1-201ENST00000329806 452 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC138969.1-213ENST00000331436 462 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 SNORA51.2-201ENST00000364595 132 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 Y_RNA.318-201ENST00000365131 97 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CX3CL1P78423 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.27□□□□□ -1.89
CX3CL1P78423 HMGN1P14-201ENST00000412459 517 ntBASIC3.27□□□□□ -1.89
CX3CL1P78423 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms