Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HMGB1P47-201ENST00000511281 589 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 AC016065.2-201ENST00000514530 444 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 RPL7P20-201ENST00000520308 745 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 AC027309.2-201ENST00000520566 192 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.5□□□□□ -2.01
AP1S1P61966 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.5□□□□□ -2.01
AP1S1P61966 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.5□□□□□ -2.01
AP1S1P61966 AL161734.1-201ENST00000609720 557 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.5□□□□□ -2.01
AP1S1P61966 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.5□□□□□ -2.01
AP1S1P61966 AC119674.1-220ENST00000641502 1048 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
AP1S1P61966 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
AP1S1P61966 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
AP1S1P61966 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S1P61966 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
AP1S1P61966 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 BTBD10P2-201ENST00000404779 676 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AL162578.1-201ENST00000406202 378 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S1P61966 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
AP1S1P61966 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.49□□□□□ -2.01
AP1S1P61966 FCF1P1-201ENST00000432690 571 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC236972.1-201ENST00000433225 199 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S1P61966 RAD1P2-201ENST00000446414 663 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S1P61966 AC104689.1-201ENST00000473356 768 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.49□□□□□ -2.01
AP1S1P61966 HMGB1P22-201ENST00000505315 124 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S1P61966 HMGB1P41-201ENST00000520234 440 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 OR5BN1P-201ENST00000532955 829 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.49□□□□□ -2.01
AP1S1P61966 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 EIF1AXP2-201ENST00000555940 413 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC009097.3-201ENST00000563557 1018 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC090751.1-201ENST00000566966 267 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC009163.5-201ENST00000575421 637 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 AC103798.2-201ENST00000624292 632 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 CTSLP2-204ENST00000629029 392 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
AP1S1P61966 AC022031.1-201ENST00000585985 2593 ntBASIC2.49□□□□□ -2.01
AP1S1P61966 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S1P61966 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
AP1S1P61966 RNU6-629P-201ENST00000384061 103 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 RNU4-74P-201ENST00000411280 161 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC092447.6-201ENST00000414578 210 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AL137014.1-201ENST00000420490 1226 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC005517.2-201ENST00000424673 553 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
AP1S1P61966 RPS7P2-201ENST00000435134 607 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.48□□□□□ -2.01
AP1S1P61966 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.48□□□□□ -2.01
AP1S1P61966 AL513328.1-201ENST00000446460 224 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.48□□□□□ -2.01
AP1S1P61966 NPM1P13-201ENST00000452663 865 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
AP1S1P61966 UBE2DNL-203ENST00000474922 222 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.48□□□□□ -2.01
AP1S1P61966 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.48□□□□□ -2.01
AP1S1P61966 AP001646.1-201ENST00000527936 915 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC139103.1-201ENST00000534696 1030 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
AP1S1P61966 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.48□□□□□ -2.01
AP1S1P61966 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.48□□□□□ -2.01
AP1S1P61966 AC024560.3-201ENST00000608482 349 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.48□□□□□ -2.01
AP1S1P61966 AC243829.7-201ENST00000633081 225 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
AP1S1P61966 AL512283.1-201ENST00000606756 1384 ntBASIC2.48□□□□□ -2.01
AP1S1P61966 ZNF734P-201ENST00000419494 1534 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S1P61966 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S1P61966 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 RNU6-819P-201ENST00000364116 107 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S1P61966 RNU4-31P-201ENST00000384211 141 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 Y_RNA.500-201ENST00000384466 111 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 SNORA41-201ENST00000384675 132 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.47□□□□□ -2.01
AP1S1P61966 ATF1P1-201ENST00000406040 927 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 MRPS33P4-201ENST00000434892 317 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 HMGB1P48-201ENST00000446155 598 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 SNORA59A-201ENST00000459326 152 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 RPL36AP51-201ENST00000487216 318 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S1P61966 NAMPTP2-201ENST00000505629 1115 ntBASIC2.47□□□□□ -2.01
AP1S1P61966 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms