Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.32□□□□□ -2.04
CMC4P56277 HSPE1P3-201ENST00000559254 309 ntBASIC2.32□□□□□ -2.04
CMC4P56277 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.32□□□□□ -2.04
CMC4P56277 LARP7P2-201ENST00000575306 125 ntBASIC2.32□□□□□ -2.04
CMC4P56277 AC069545.1-201ENST00000605671 358 ntBASIC2.32□□□□□ -2.04
CMC4P56277 RNU6-1192P-201ENST00000612197 107 ntBASIC2.32□□□□□ -2.04
CMC4P56277 RNU6-489P-201ENST00000618289 107 ntBASIC2.32□□□□□ -2.04
CMC4P56277 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.32□□□□□ -2.04
CMC4P56277 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
CMC4P56277 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CMC4P56277 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CMC4P56277 Z99496.1-201ENST00000469424 1477 ntBASIC2.32□□□□□ -2.04
CMC4P56277 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.32□□□□□ -2.04
CMC4P56277 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.31□□□□□ -2.04
CMC4P56277 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CMC4P56277 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 MIR22-201ENST00000362190 85 ntBASIC2.31□□□□□ -2.04
CMC4P56277 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CMC4P56277 RPS3AP26-201ENST00000398259 784 ntBASIC2.31□□□□□ -2.04
CMC4P56277 RNU2-15P-201ENST00000410692 191 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC096533.1-201ENST00000411645 353 ntBASIC2.31□□□□□ -2.04
CMC4P56277 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC063979.1-201ENST00000415539 377 ntBASIC2.31□□□□□ -2.04
CMC4P56277 MTND4P3-201ENST00000417829 541 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 RPS15AP6-201ENST00000420703 385 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AL049610.1-201ENST00000423374 372 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 C1DP1-201ENST00000426049 402 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AL512649.1-201ENST00000428997 581 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC012497.1-201ENST00000429392 575 ntBASIC2.31□□□□□ -2.04
CMC4P56277 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 SNRPEP4-201ENST00000435815 279 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC004866.2-201ENST00000438285 481 ntBASIC2.31□□□□□ -2.04
CMC4P56277 USP9YP22-201ENST00000438971 294 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC093155.1-201ENST00000440164 826 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.31□□□□□ -2.04
CMC4P56277 RPL17P49-201ENST00000443728 411 ntBASIC2.31□□□□□ -2.04
CMC4P56277 HMGB3P6-201ENST00000444896 598 ntBASIC2.31□□□□□ -2.04
CMC4P56277 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 Z82190.1-201ENST00000454534 490 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 OR2A20P-203ENST00000498397 1268 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 AC069306.1-201ENST00000507006 843 ntBASIC2.31□□□□□ -2.04
CMC4P56277 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.31□□□□□ -2.04
CMC4P56277 FAM60BP-201ENST00000578364 658 ntBASIC2.31□□□□□ -2.04
CMC4P56277 MIR5708-201ENST00000579723 85 ntBASIC2.31□□□□□ -2.04
CMC4P56277 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 AL445435.1-201ENST00000604232 665 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC024060.1-201ENST00000607052 494 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 AC005332.6-201ENST00000613178 446 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC023158.2-201ENST00000614876 543 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC068831.7-201ENST00000616954 363 ntBASIC2.31□□□□□ -2.04
CMC4P56277 AC095031.1-201ENST00000623685 672 ntBASIC2.31□□□□□ -2.04
CMC4P56277 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CMC4P56277 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 AC007256.1-201ENST00000392253 2765 ntBASIC2.31□□□□□ -2.04
CMC4P56277 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CMC4P56277 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.31□□□□□ -2.04
CMC4P56277 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CMC4P56277 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.3□□□□□ -2.04
CMC4P56277 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.3□□□□□ -2.04
CMC4P56277 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CMC4P56277 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CMC4P56277 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CMC4P56277 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CMC4P56277 MIR422A-201ENST00000362286 90 ntBASIC2.3□□□□□ -2.04
CMC4P56277 SNORD56.3-201ENST00000363507 71 ntBASIC2.3□□□□□ -2.04
CMC4P56277 RNU4-51P-201ENST00000364206 140 ntBASIC2.3□□□□□ -2.04
CMC4P56277 RNU1-140P-201ENST00000365040 165 ntBASIC2.3□□□□□ -2.04
CMC4P56277 Z98941.1-201ENST00000407764 100 ntBASIC2.3□□□□□ -2.04
CMC4P56277 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.3□□□□□ -2.04
CMC4P56277 RN7SKP220-201ENST00000410611 288 ntBASIC2.3□□□□□ -2.04
CMC4P56277 AC109780.2-201ENST00000413467 845 ntBASIC2.3□□□□□ -2.04
CMC4P56277 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.3□□□□□ -2.04
CMC4P56277 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms