Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
LIM2P55344 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 HMGB1P28-201ENST00000507778 552 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 AC079395.1-201ENST00000510981 262 ntBASIC3.01□□□□□ -1.93
LIM2P55344 USP9YP5-201ENST00000511770 630 ntBASIC3.01□□□□□ -1.93
LIM2P55344 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC104986.1-201ENST00000517978 436 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.01□□□□□ -1.93
LIM2P55344 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 AL121603.1-201ENST00000553815 142 ntBASIC3.01□□□□□ -1.93
LIM2P55344 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 MIR3186-201ENST00000577404 85 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
LIM2P55344 AC022662.1-201ENST00000580252 331 ntBASIC3.01□□□□□ -1.93
LIM2P55344 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 CCDC58P3-201ENST00000590792 430 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 AC090425.2-201ENST00000608818 501 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AL450489.1-201ENST00000612071 468 ntBASIC3.01□□□□□ -1.93
LIM2P55344 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.01□□□□□ -1.93
LIM2P55344 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.01□□□□□ -1.93
LIM2P55344 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LIM2P55344 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
LIM2P55344 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIM2P55344 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.01□□□□□ -1.93
LIM2P55344 MTND5P24-201ENST00000438892 1767 ntBASIC3□□□□□ -1.93
LIM2P55344 AL079343.1-201ENST00000572358 1771 ntBASIC3□□□□□ -1.93
LIM2P55344 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 RNU6-600P-201ENST00000362524 99 ntBASIC3□□□□□ -1.93
LIM2P55344 SNORD46.1-201ENST00000364139 104 ntBASIC3□□□□□ -1.93
LIM2P55344 SNORA72.3-201ENST00000365074 132 ntBASIC3□□□□□ -1.93
LIM2P55344 RNU4-78P-201ENST00000410940 126 ntBASIC3□□□□□ -1.93
LIM2P55344 RNU2-71P-201ENST00000411395 189 ntBASIC3□□□□□ -1.93
LIM2P55344 AC068533.2-201ENST00000411872 306 ntBASIC3□□□□□ -1.93
LIM2P55344 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 TOMM22P1-201ENST00000418578 312 ntBASIC3□□□□□ -1.93
LIM2P55344 AL159169.1-201ENST00000421119 127 ntBASIC3□□□□□ -1.93
LIM2P55344 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3□□□□□ -1.93
LIM2P55344 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 MTND2P5-201ENST00000432656 1006 ntBASIC3□□□□□ -1.93
LIM2P55344 FTH1P1-201ENST00000437933 532 ntBASIC3□□□□□ -1.93
LIM2P55344 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 RPL23AP76-201ENST00000441860 458 ntBASIC3□□□□□ -1.93
LIM2P55344 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 OFD1P3Y-201ENST00000453312 783 ntBASIC3□□□□□ -1.93
LIM2P55344 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
LIM2P55344 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 SNRPGP3-201ENST00000469405 227 ntBASIC3□□□□□ -1.93
LIM2P55344 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 VN1R17P-201ENST00000472048 1090 ntBASIC3□□□□□ -1.93
LIM2P55344 UBE2Q2P9-201ENST00000490086 202 ntBASIC3□□□□□ -1.93
LIM2P55344 AC090453.1-201ENST00000495560 436 ntBASIC3□□□□□ -1.93
LIM2P55344 GTF2IP9-201ENST00000502460 301 ntBASIC3□□□□□ -1.93
LIM2P55344 KCTD9P5-201ENST00000504141 1170 ntBASIC3□□□□□ -1.93
LIM2P55344 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3□□□□□ -1.93
LIM2P55344 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AC109445.1-201ENST00000512356 383 ntBASIC3□□□□□ -1.93
LIM2P55344 AC008837.2-201ENST00000513076 418 ntBASIC3□□□□□ -1.93
LIM2P55344 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 MIR3690-201ENST00000580266 75 ntBASIC3□□□□□ -1.93
LIM2P55344 SNORD84-203ENST00000584275 78 ntBASIC3□□□□□ -1.93
LIM2P55344 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3□□□□□ -1.93
LIM2P55344 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3□□□□□ -1.93
LIM2P55344 AL451074.6-201ENST00000608512 729 ntBASIC3□□□□□ -1.93
LIM2P55344 AC138932.5-201ENST00000617759 563 ntBASIC3□□□□□ -1.93
LIM2P55344 AC018816.2-201ENST00000621460 353 ntBASIC3□□□□□ -1.93
LIM2P55344 AC092628.2-201ENST00000622492 339 ntBASIC3□□□□□ -1.93
LIM2P55344 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 AC040168.1-201ENST00000623594 991 ntBASIC3□□□□□ -1.93
LIM2P55344 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3□□□□□ -1.93
LIM2P55344 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LIM2P55344 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3□□□□□ -1.93
LIM2P55344 AC066616.2-201ENST00000559334 1481 ntBASIC3□□□□□ -1.93
LIM2P55344 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LIM2P55344 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms