Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 RPL21P112-201ENST00000434403 463 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 GTF2IP7-202ENST00000436677 309 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC079776.3-201ENST00000450665 370 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 ST13P14-201ENST00000474095 734 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC069528.1-202ENST00000482888 637 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC084024.2-201ENST00000503480 791 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS2P54868 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.39□□□□□ -1.87
HMGCS2P54868 OR5D17P-201ENST00000531492 978 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 OR8K4P-201ENST00000534608 872 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC107016.2-201ENST00000547968 190 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC013244.3-201ENST00000605614 388 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AC013412.1-201ENST00000610687 192 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 IGHVIII-44-202ENST00000636235 289 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HMGCS2P54868 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AP005901.5-201ENST00000545779 1796 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS2P54868 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGCS2P54868 RNU4-82P-201ENST00000362443 140 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RNU6-839P-201ENST00000363347 108 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 SNORA9.2-201ENST00000365361 133 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 SNORD116-23-201ENST00000384645 92 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 ANAPC10P1-201ENST00000395991 556 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RPS4XP8-201ENST00000402039 771 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC069218.2-201ENST00000411665 344 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AL139413.1-201ENST00000421309 217 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC004022.1-201ENST00000447766 1066 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 NPM1P49-201ENST00000448027 714 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 RPS15AP1-201ENST00000457423 391 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 NF1P3-201ENST00000457709 450 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RPS27AP1-201ENST00000475545 471 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 NCOR1P1-202ENST00000486162 291 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 NIPA2P2-201ENST00000496376 1083 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 DYNLL1P6-201ENST00000503440 264 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC048346.1-201ENST00000510247 144 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS2P54868 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RN7SKP265-201ENST00000516448 223 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 RNA5SP135-201ENST00000517019 125 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGCS2P54868 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 EIF5A2P1-201ENST00000564027 460 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC023813.2-201ENST00000564321 469 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 RPL23AP92-201ENST00000603609 255 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC063944.3-201ENST00000609969 533 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGCS2P54868 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGCS2P54868 AC096644.4-201ENST00000563417 2912 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS2P54868 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
HMGCS2P54868 AC099786.3-201ENST00000565735 1410 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HMGCS2P54868 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 MIR513B-201ENST00000385136 84 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 ERHP2-201ENST00000402323 299 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 RPL30P2-201ENST00000414021 291 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AC063976.3-201ENST00000426849 329 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AC010881.1-201ENST00000433830 235 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 EEF1A1P39-201ENST00000440791 250 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms