Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC105914.1-201ENST00000511798 226 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 RNU5A-4P-201ENST00000516588 111 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 NARSP2-201ENST00000518524 679 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 PDCL2P2-201ENST00000533651 189 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMK1P53667 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 AC022968.1-201ENST00000567372 442 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC245036.5-201ENST00000596330 847 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC104662.1-201ENST00000604448 511 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC026790.2-201ENST00000606282 430 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC011816.2-201ENST00000607089 556 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 TUSC7.1-201ENST00000610969 165 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC091925.2-201ENST00000625059 256 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMK1P53667 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMK1P53667 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMK1P53667 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
LIMK1P53667 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
LIMK1P53667 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 RNU6-83P-201ENST00000384568 112 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 MTATP6P27-201ENST00000416987 621 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 XKRYP1-201ENST00000423438 492 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 XKRYP2-201ENST00000432915 492 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 Z74696.2-201ENST00000436514 498 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 TRGVB-201ENST00000453257 471 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 RBMY2UP-201ENST00000453474 324 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AC008155.2-201ENST00000464337 397 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 RPS4XP10-201ENST00000465034 731 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AC090453.1-201ENST00000495560 436 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 AC103843.2-201ENST00000530523 682 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
LIMK1P53667 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
LIMK1P53667 AC055876.5-201ENST00000605667 259 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AC107952.2-201ENST00000606048 486 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AC245297.2-201ENST00000610119 565 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIMK1P53667 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 AL356473.1-201ENST00000406203 1408 ntBASIC3.7□□□□□ -1.82
LIMK1P53667 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 MTND5P24-201ENST00000438892 1767 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LIMK1P53667 RNU6-621P-201ENST00000364752 109 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 RPS3AP26-201ENST00000398259 784 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 UBA52P6-201ENST00000399822 382 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AL031679.1-201ENST00000400616 525 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 USP9YP36-201ENST00000424581 829 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 SNRPEP4-201ENST00000435815 279 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 MTCO2P20-201ENST00000437339 673 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.69□□□□□ -1.82
LIMK1P53667 BTF3P5-201ENST00000457252 467 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC097493.1-201ENST00000463958 372 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 HMGN2P13-201ENST00000476476 274 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 RPL7P23-201ENST00000493874 747 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC021146.8-201ENST00000507455 733 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 RNU6-150P-201ENST00000516237 95 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 EEF1A1P37-201ENST00000522748 715 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 EEF1B2P4-201ENST00000551398 348 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC126177.3-201ENST00000551839 688 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms