Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 AC010733.2-201ENST00000589496 5702 ntBASIC3.54□□□□□ -1.84
PDX1P52945 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDX1P52945 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 RNU6-723P-201ENST00000383973 107 ntBASIC3.54□□□□□ -1.84
PDX1P52945 SNORD116-2-201ENST00000384274 95 ntBASIC3.54□□□□□ -1.84
PDX1P52945 RNU6-878P-201ENST00000384578 110 ntBASIC3.54□□□□□ -1.84
PDX1P52945 Y_RNA.560-201ENST00000384689 102 ntBASIC3.54□□□□□ -1.84
PDX1P52945 SNORD116-6-201ENST00000384711 96 ntBASIC3.54□□□□□ -1.84
PDX1P52945 RN7SKP56-201ENST00000410513 331 ntBASIC3.54□□□□□ -1.84
PDX1P52945 RNU2-15P-201ENST00000410692 191 ntBASIC3.54□□□□□ -1.84
PDX1P52945 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 AL158156.1-201ENST00000422509 473 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AC019178.2-201ENST00000423595 505 ntBASIC3.54□□□□□ -1.84
PDX1P52945 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 UBE2FP3-201ENST00000436366 524 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC098824.1-201ENST00000453565 980 ntBASIC3.54□□□□□ -1.84
PDX1P52945 BX510359.1-201ENST00000456973 237 ntBASIC3.54□□□□□ -1.84
PDX1P52945 RPL30P6-201ENST00000475925 342 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 SCARNA13-201ENST00000516672 275 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 IGHV3-32-201ENST00000519182 355 ntBASIC3.54□□□□□ -1.84
PDX1P52945 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
PDX1P52945 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
PDX1P52945 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 BBIP1P1-201ENST00000602999 279 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.54□□□□□ -1.84
PDX1P52945 AC080013.4-201ENST00000607624 649 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AC122133.1-201ENST00000613964 233 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AL445264.1-201ENST00000621719 171 ntBASIC3.54□□□□□ -1.84
PDX1P52945 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.54□□□□□ -1.84
PDX1P52945 MIR3651-201ENST00000630427 90 ntBASIC3.54□□□□□ -1.84
PDX1P52945 MIR3974-201ENST00000637126 96 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AC099063.3-201ENST00000642066 185 ntBASIC3.54□□□□□ -1.84
PDX1P52945 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
PDX1P52945 HSPA8P1-201ENST00000425843 1833 ntBASIC3.54□□□□□ -1.84
PDX1P52945 AL365440.1-201ENST00000436135 2167 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 MTND4P16-201ENST00000466108 1367 ntBASIC3.53□□□□□ -1.84
PDX1P52945 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 AL133412.1-201ENST00000380194 2992 ntBASIC3.53□□□□□ -1.84
PDX1P52945 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PDX1P52945 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 RNU6-462P-201ENST00000362659 105 ntBASIC3.53□□□□□ -1.84
PDX1P52945 RNU6-821P-201ENST00000390995 107 ntBASIC3.53□□□□□ -1.84
PDX1P52945 Z98941.1-201ENST00000407764 100 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC083875.1-201ENST00000419509 405 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AL590103.1-201ENST00000434488 307 ntBASIC3.53□□□□□ -1.84
PDX1P52945 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.53□□□□□ -1.84
PDX1P52945 MTCO1P27-201ENST00000448269 226 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC097262.1-201ENST00000452559 548 ntBASIC3.53□□□□□ -1.84
PDX1P52945 RPS27AP8-201ENST00000452665 445 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.53□□□□□ -1.84
PDX1P52945 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 RPL30P9-201ENST00000465586 330 ntBASIC3.53□□□□□ -1.84
PDX1P52945 HMGB1P25-201ENST00000468402 607 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AP000926.1-201ENST00000479573 241 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC023424.2-201ENST00000493479 777 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.53□□□□□ -1.84
PDX1P52945 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.53□□□□□ -1.84
PDX1P52945 SNORA70.18-201ENST00000516696 98 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.53□□□□□ -1.84
PDX1P52945 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.53□□□□□ -1.84
PDX1P52945 MTCO1P47-201ENST00000523889 1271 ntBASIC3.53□□□□□ -1.84
PDX1P52945 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 OR6C7P-201ENST00000547875 934 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC007954.1-201ENST00000554198 494 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms