Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC092326.2-201ENST00000624772 1561 ntBASIC4.35□□□□□ -1.71
NEK3P51956 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NEK3P51956 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.35□□□□□ -1.71
NEK3P51956 AL353746.1-201ENST00000566293 6881 ntBASIC4.34□□□□□ -1.71
NEK3P51956 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEK3P51956 MIR1290-201ENST00000408735 78 ntBASIC4.34□□□□□ -1.71
NEK3P51956 RN7SKP56-201ENST00000410513 331 ntBASIC4.34□□□□□ -1.71
NEK3P51956 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AC078974.1-201ENST00000411597 223 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.34□□□□□ -1.71
NEK3P51956 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.34□□□□□ -1.71
NEK3P51956 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEK3P51956 AL356583.2-201ENST00000426536 280 ntBASIC4.34□□□□□ -1.71
NEK3P51956 GSTA7P-201ENST00000438425 448 ntBASIC4.34□□□□□ -1.71
NEK3P51956 TPT1P14-201ENST00000448018 505 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
NEK3P51956 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.34□□□□□ -1.71
NEK3P51956 AC108059.3-201ENST00000456388 214 ntBASIC4.34□□□□□ -1.71
NEK3P51956 OR9M1P-201ENST00000459641 921 ntBASIC4.34□□□□□ -1.71
NEK3P51956 RPS3AP50-201ENST00000487064 803 ntBASIC4.34□□□□□ -1.71
NEK3P51956 RN7SL691P-201ENST00000494487 301 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AL592156.1-201ENST00000508758 304 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AC060788.1-201ENST00000521318 469 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AP000857.1-201ENST00000532151 543 ntBASIC4.34□□□□□ -1.71
NEK3P51956 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.34□□□□□ -1.71
NEK3P51956 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NEK3P51956 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
NEK3P51956 AL391156.1-201ENST00000554965 554 ntBASIC4.34□□□□□ -1.71
NEK3P51956 ZNF519P3-201ENST00000557158 1032 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AL356432.3-201ENST00000568952 465 ntBASIC4.34□□□□□ -1.71
NEK3P51956 AL354984.3-201ENST00000604803 325 ntBASIC4.34□□□□□ -1.71
NEK3P51956 uc_338.32-201ENST00000615087 172 ntBASIC4.34□□□□□ -1.71
NEK3P51956 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NEK3P51956 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.34□□□□□ -1.71
NEK3P51956 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.34□□□□□ -1.71
NEK3P51956 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.34□□□□□ -1.71
NEK3P51956 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
NEK3P51956 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NEK3P51956 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
NEK3P51956 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEK3P51956 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC116667.1-201ENST00000604855 2072 ntBASIC4.33□□□□□ -1.72
NEK3P51956 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.33□□□□□ -1.72
NEK3P51956 RNU5E-8P-201ENST00000363502 116 ntBASIC4.33□□□□□ -1.72
NEK3P51956 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEK3P51956 MIR19A-201ENST00000384878 82 ntBASIC4.33□□□□□ -1.72
NEK3P51956 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEK3P51956 AL583835.1-201ENST00000399570 407 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AL109755.1-201ENST00000401791 649 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 AL157831.1-201ENST00000426134 473 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.33□□□□□ -1.72
NEK3P51956 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEK3P51956 NUTF2P7-201ENST00000453086 375 ntBASIC4.33□□□□□ -1.72
NEK3P51956 DNAJC19P1-201ENST00000455312 319 ntBASIC4.33□□□□□ -1.72
NEK3P51956 RPL7P19-201ENST00000469948 618 ntBASIC4.33□□□□□ -1.72
NEK3P51956 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
NEK3P51956 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.33□□□□□ -1.72
NEK3P51956 AC108860.1-201ENST00000484521 383 ntBASIC4.33□□□□□ -1.72
NEK3P51956 NIPA2P2-201ENST00000496376 1083 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC004069.2-201ENST00000505438 1114 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.33□□□□□ -1.72
NEK3P51956 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
NEK3P51956 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
NEK3P51956 PAICSP4-201ENST00000517543 1253 ntBASIC4.33□□□□□ -1.72
NEK3P51956 ERHP1-201ENST00000523006 310 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC090281.1-201ENST00000523019 276 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.33□□□□□ -1.72
NEK3P51956 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.33□□□□□ -1.72
NEK3P51956 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.33□□□□□ -1.72
NEK3P51956 AC006116.10-201ENST00000591836 581 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC121334.2-201ENST00000605387 271 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC007038.2-201ENST00000608095 740 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AL355472.4-201ENST00000610233 626 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC064801.1-201ENST00000612025 407 ntBASIC4.33□□□□□ -1.72
NEK3P51956 FAM27D1-201ENST00000612308 341 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC007546.1-201ENST00000619452 559 ntBASIC4.33□□□□□ -1.72
NEK3P51956 MIR4727-201ENST00000622232 55 ntBASIC4.33□□□□□ -1.72
NEK3P51956 AC010149.2-201ENST00000637608 315 ntBASIC4.33□□□□□ -1.72
NEK3P51956 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NEK3P51956 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NEK3P51956 MARK2P15-201ENST00000432204 2186 ntBASIC4.33□□□□□ -1.72
NEK3P51956 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.32□□□□□ -1.72
NEK3P51956 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.32□□□□□ -1.72
NEK3P51956 LARP1BP1-201ENST00000506036 1359 ntBASIC4.32□□□□□ -1.72
NEK3P51956 RNU1-14P-201ENST00000362759 152 ntBASIC4.32□□□□□ -1.72
NEK3P51956 RNU5A-8P-201ENST00000364102 114 ntBASIC4.32□□□□□ -1.72
NEK3P51956 DEFB109C-201ENST00000382575 264 ntBASIC4.32□□□□□ -1.72
NEK3P51956 DEFB109B-201ENST00000382656 264 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms