Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC244035.1-201ENST00000430042 390 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 AC010153.1-201ENST00000432862 727 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 SNRPEP7-201ENST00000438350 220 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 AL356535.1-201ENST00000440335 398 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 ATP5C1P1-201ENST00000441945 895 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 RNU7-136P-201ENST00000458819 69 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCN3P51790 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCN3P51790 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.94□□□□□ -1.78
CLCN3P51790 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC136618.2-201ENST00000575091 400 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCN3P51790 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.94□□□□□ -1.78
CLCN3P51790 AL590229.1-201ENST00000603497 542 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 HMGB1P50-201ENST00000605814 607 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 AC024560.3-201ENST00000608482 349 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 OR6R2P-201ENST00000609216 300 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 AC011477.1-204ENST00000623416 1325 ntBASIC3.94□□□□□ -1.78
CLCN3P51790 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCN3P51790 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCN3P51790 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 AC087359.1-201ENST00000508335 1740 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCN3P51790 RNU6-500P-201ENST00000362349 107 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 Y_RNA.18-201ENST00000362461 102 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 RNU4-35P-201ENST00000362588 141 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 U3.15-201ENST00000365398 212 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AL031577.2-201ENST00000404133 280 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 MTHFD2P2-201ENST00000407725 247 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 RPL23AP39-201ENST00000415533 405 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 RAC1P3-201ENST00000416129 580 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC083875.1-201ENST00000419509 405 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 BX842559.1-201ENST00000419615 532 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 MTCO2P5-201ENST00000422621 426 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 GLRXP1-201ENST00000423261 334 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC097713.2-201ENST00000430199 356 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 EZH2P1-201ENST00000431167 291 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCN3P51790 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCN3P51790 RPS20P24-201ENST00000457473 361 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC087312.1-201ENST00000471411 480 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC022861.1-201ENST00000522981 663 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC007115.1-201ENST00000546853 234 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCN3P51790 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 AL669831.4-202ENST00000590817 238 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCN3P51790 IGHV3-29-201ENST00000604817 344 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC096577.2-201ENST00000611455 153 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC013562.2-201ENST00000611632 603 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 AC004009.2-201ENST00000623016 728 ntBASIC3.93□□□□□ -1.78
CLCN3P51790 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCN3P51790 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLCN3P51790 AC006504.1-201ENST00000562493 3666 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCN3P51790 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCN3P51790 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCN3P51790 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCN3P51790 U3.29-201ENST00000391296 212 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 DHFRP6-201ENST00000401776 268 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AL121972.1-201ENST00000402023 252 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 HSPD1P16-201ENST00000402302 394 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 AC129850.1-201ENST00000436203 508 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCN3P51790 UBE2FP3-201ENST00000436366 524 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 MTCO2P16-201ENST00000436962 677 ntBASIC3.92□□□□□ -1.78
CLCN3P51790 MUPP-201ENST00000438111 566 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms