Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC110801.1-201ENST00000623590 212 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC079228.1-201ENST00000624774 1049 ntBASIC3.61□□□□□ -1.83
LHX1P48742 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC097714.1-201ENST00000511272 1647 ntBASIC3.61□□□□□ -1.83
LHX1P48742 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 AL157700.1-201ENST00000561973 1432 ntBASIC3.61□□□□□ -1.83
LHX1P48742 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
LHX1P48742 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
LHX1P48742 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LHX1P48742 USP8P1-201ENST00000494673 3183 ntBASIC3.6□□□□□ -1.83
LHX1P48742 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LHX1P48742 SNORD51-201ENST00000384320 80 ntBASIC3.6□□□□□ -1.83
LHX1P48742 U3.19-201ENST00000390893 196 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL031679.1-201ENST00000400616 525 ntBASIC3.6□□□□□ -1.83
LHX1P48742 BX323014.1-201ENST00000412876 237 ntBASIC3.6□□□□□ -1.83
LHX1P48742 Z99755.1-201ENST00000414048 380 ntBASIC3.6□□□□□ -1.83
LHX1P48742 TPMTP2-201ENST00000414372 726 ntBASIC3.6□□□□□ -1.83
LHX1P48742 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.6□□□□□ -1.83
LHX1P48742 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.6□□□□□ -1.83
LHX1P48742 AL590233.1-201ENST00000430017 456 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.6□□□□□ -1.83
LHX1P48742 AL365396.1-201ENST00000430854 671 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL354941.1-201ENST00000438600 464 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL109741.2-201ENST00000455561 343 ntBASIC3.6□□□□□ -1.83
LHX1P48742 snoU109.4-201ENST00000458953 143 ntBASIC3.6□□□□□ -1.83
LHX1P48742 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
LHX1P48742 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.6□□□□□ -1.83
LHX1P48742 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.6□□□□□ -1.83
LHX1P48742 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.6□□□□□ -1.83
LHX1P48742 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.6□□□□□ -1.83
LHX1P48742 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LHX1P48742 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.6□□□□□ -1.83
LHX1P48742 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
LHX1P48742 MIR4276-201ENST00000584832 70 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL031985.2-201ENST00000600955 480 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL034351.1-201ENST00000605288 668 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC128687.1-201ENST00000605304 619 ntBASIC3.6□□□□□ -1.83
LHX1P48742 Z99289.3-201ENST00000605586 594 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC055876.5-201ENST00000605667 259 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC011816.2-201ENST00000607089 556 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.6□□□□□ -1.83
LHX1P48742 AL450489.1-201ENST00000612071 468 ntBASIC3.6□□□□□ -1.83
LHX1P48742 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.6□□□□□ -1.83
LHX1P48742 AC127502.3-201ENST00000636170 1206 ntBASIC3.6□□□□□ -1.83
LHX1P48742 AC103706.2-201ENST00000638080 240 ntBASIC3.6□□□□□ -1.83
LHX1P48742 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LHX1P48742 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LHX1P48742 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.6□□□□□ -1.83
LHX1P48742 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
LHX1P48742 DDX43P2-201ENST00000604753 1354 ntBASIC3.6□□□□□ -1.83
LHX1P48742 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
LHX1P48742 AC017071.1-201ENST00000564407 2204 ntBASIC3.59□□□□□ -1.83
LHX1P48742 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LHX1P48742 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LHX1P48742 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LHX1P48742 RPL7P30-201ENST00000420888 709 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC017083.1-201ENST00000428093 483 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC005326.1-201ENST00000429197 123 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AL158071.1-201ENST00000430315 461 ntBASIC3.59□□□□□ -1.83
LHX1P48742 ZYG11AP1-201ENST00000430329 837 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 YWHAZP7-201ENST00000436906 631 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 NPM1P49-201ENST00000448027 714 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 RPL23AP35-201ENST00000451906 501 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.59□□□□□ -1.83
LHX1P48742 MEMO1P3-201ENST00000459811 302 ntBASIC3.59□□□□□ -1.83
LHX1P48742 RPS4XP10-201ENST00000465034 731 ntBASIC3.59□□□□□ -1.83
LHX1P48742 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 HMGB1P25-201ENST00000468402 607 ntBASIC3.59□□□□□ -1.83
LHX1P48742 RN7SL807P-201ENST00000470923 297 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC004263.1-201ENST00000479327 332 ntBASIC3.59□□□□□ -1.83
LHX1P48742 FCF1P3-201ENST00000496394 590 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 AC147055.4-201ENST00000504399 745 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.59□□□□□ -1.83
LHX1P48742 AC023141.12-201ENST00000512399 199 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC026407.1-201ENST00000518369 204 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
LHX1P48742 MTCYBP41-201ENST00000528913 1123 ntBASIC3.59□□□□□ -1.83
LHX1P48742 UBE2NP1-201ENST00000545592 458 ntBASIC3.59□□□□□ -1.83
LHX1P48742 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 ZNF321P-202ENST00000550843 495 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.59□□□□□ -1.83
LHX1P48742 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.59□□□□□ -1.83
LHX1P48742 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.59□□□□□ -1.83
LHX1P48742 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
LHX1P48742 AC012468.1-201ENST00000604888 430 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC096577.2-201ENST00000611455 153 ntBASIC3.59□□□□□ -1.83
LHX1P48742 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LHX1P48742 AL607023.1-201ENST00000620045 248 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AL356321.1-201ENST00000621360 228 ntBASIC3.59□□□□□ -1.83
LHX1P48742 AC017037.3-201ENST00000625016 472 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms