Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 AK6P1-201ENST00000540219 478 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC069240.1-201ENST00000548774 375 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AL352979.3-201ENST00000553515 247 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AL512360.1-201ENST00000555346 234 ntBASIC3.82□□□□□ -1.8
SOX2P48431 COX6CP3-201ENST00000580869 223 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX2P48431 AP000907.4-201ENST00000604143 237 ntBASIC3.82□□□□□ -1.8
SOX2P48431 uc_338.12-201ENST00000616344 181 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC099669.2-201ENST00000616549 437 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC022306.2-201ENST00000617563 647 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC006338.1-201ENST00000618453 749 ntBASIC3.82□□□□□ -1.8
SOX2P48431 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SOX2P48431 AC139792.3-201ENST00000623525 224 ntBASIC3.82□□□□□ -1.8
SOX2P48431 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 AC022893.2-201ENST00000564832 3296 ntBASIC3.82□□□□□ -1.8
SOX2P48431 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SOX2P48431 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SOX2P48431 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.81□□□□□ -1.8
SOX2P48431 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
SOX2P48431 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SOX2P48431 AC109780.1-201ENST00000451768 1344 ntBASIC3.81□□□□□ -1.8
SOX2P48431 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNA5SP388-201ENST00000362584 119 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU6-263P-201ENST00000363811 107 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU5A-8P-201ENST00000364102 114 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU6-1078P-201ENST00000364522 103 ntBASIC3.81□□□□□ -1.8
SOX2P48431 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 RNY3P14-201ENST00000384309 102 ntBASIC3.81□□□□□ -1.8
SOX2P48431 Y_RNA.481-201ENST00000384373 102 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU6-456P-201ENST00000384493 107 ntBASIC3.81□□□□□ -1.8
SOX2P48431 SNORD66.1-201ENST00000391230 76 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RPL7P60-201ENST00000397636 735 ntBASIC3.81□□□□□ -1.8
SOX2P48431 MIR1178-201ENST00000408396 91 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU2-47P-201ENST00000410649 186 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNA5SP104-201ENST00000410989 118 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SOX2P48431 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.81□□□□□ -1.8
SOX2P48431 BX510359.3-201ENST00000422168 306 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC007283.2-201ENST00000424739 197 ntBASIC3.81□□□□□ -1.8
SOX2P48431 FTH1P6-201ENST00000430768 320 ntBASIC3.81□□□□□ -1.8
SOX2P48431 NFU1P2-201ENST00000448700 469 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AL121877.1-201ENST00000453704 622 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC091685.2-201ENST00000454924 864 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC108059.3-201ENST00000456388 214 ntBASIC3.81□□□□□ -1.8
SOX2P48431 UBDP1-202ENST00000457888 382 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RPL35AP15-201ENST00000468042 339 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX2P48431 PARP4P3-201ENST00000510265 317 ntBASIC3.81□□□□□ -1.8
SOX2P48431 TMEM248P1-201ENST00000510579 951 ntBASIC3.81□□□□□ -1.8
SOX2P48431 Y_RNA.693-201ENST00000516641 110 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNU6-528P-201ENST00000516926 100 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RNA5SP337-201ENST00000517007 109 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC022616.3-201ENST00000523940 148 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX2P48431 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX2P48431 AC025678.1-201ENST00000567861 338 ntBASIC3.81□□□□□ -1.8
SOX2P48431 RN7SL753P-201ENST00000581238 290 ntBASIC3.81□□□□□ -1.8
SOX2P48431 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX2P48431 LLPHP1-201ENST00000603571 367 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC007038.2-201ENST00000608095 740 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AP001596.2-201ENST00000608410 312 ntBASIC3.81□□□□□ -1.8
SOX2P48431 AC004908.2-201ENST00000609090 574 ntBASIC3.81□□□□□ -1.8
SOX2P48431 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
SOX2P48431 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SOX2P48431 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.81□□□□□ -1.8
SOX2P48431 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.81□□□□□ -1.8
SOX2P48431 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.81□□□□□ -1.8
SOX2P48431 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SOX2P48431 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.81□□□□□ -1.8
SOX2P48431 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SOX2P48431 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SOX2P48431 RNU6-1090P-201ENST00000364065 94 ntBASIC3.8□□□□□ -1.8
SOX2P48431 RNU6-867P-201ENST00000364956 107 ntBASIC3.8□□□□□ -1.8
SOX2P48431 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 MIR19A-201ENST00000384878 82 ntBASIC3.8□□□□□ -1.8
SOX2P48431 RNA5SP239-201ENST00000410218 129 ntBASIC3.8□□□□□ -1.8
SOX2P48431 RNU2-62P-201ENST00000410868 191 ntBASIC3.8□□□□□ -1.8
SOX2P48431 RNU4-78P-201ENST00000410940 126 ntBASIC3.8□□□□□ -1.8
SOX2P48431 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 USP9YP6-201ENST00000413550 854 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms