Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MTCO1P39-201ENST00000426148 480 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 MTCO1P19-201ENST00000443487 500 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC112653.1-201ENST00000443851 386 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 AC104308.1-201ENST00000454621 333 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 SNRPGP9-201ENST00000456025 225 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 RNU6-956P-201ENST00000458868 103 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 HMGB1P36-201ENST00000487709 576 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AP001086.1-201ENST00000494882 321 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 KLHL2P1-201ENST00000508691 521 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC093824.1-201ENST00000508796 343 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 RNA5SP519-201ENST00000516480 119 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 RN7SKP92-201ENST00000517266 244 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 IGKV2D-23-201ENST00000518179 286 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC022878.1-201ENST00000530684 149 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC105233.3-201ENST00000531125 744 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.28□□□□□ -1.88
NKX2-1P43699 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 AC022655.2-201ENST00000577280 318 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-1P43699 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 PRELID3BP8-201ENST00000604148 295 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC090948.1-201ENST00000607464 549 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC090425.2-201ENST00000608818 501 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AL355810.1-201ENST00000614629 552 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC048347.1-201ENST00000624621 427 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-1P43699 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NKX2-1P43699 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX2-1P43699 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX2-1P43699 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NKX2-1P43699 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NKX2-1P43699 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC012618.3-205ENST00000637896 1496 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
NKX2-1P43699 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC092104.1-201ENST00000497346 1441 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 MTND4P16-201ENST00000466108 1367 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 TAB3P1-202ENST00000452645 1634 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC009902.3-201ENST00000606235 2172 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 RNU5E-5P-201ENST00000365379 116 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 SNORA75-201ENST00000384158 137 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 MIR192-201ENST00000384915 110 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 U3.20-201ENST00000390909 217 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL136372.1-201ENST00000403060 228 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 RN7SKP142-201ENST00000411236 328 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL356387.2-201ENST00000422272 243 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-1P43699 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 HMGB1P12-201ENST00000438594 598 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC006011.1-201ENST00000442758 349 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL162151.2-201ENST00000448875 158 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC010655.1-201ENST00000449336 292 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-1P43699 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 OR6K1P-201ENST00000456766 971 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 RN7SL738P-201ENST00000470264 297 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC092451.1-201ENST00000480211 153 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL139099.1-201ENST00000497398 403 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AK3P4-201ENST00000504283 583 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 MLLT10P2-201ENST00000506434 249 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 NDUFB4P9-201ENST00000511646 388 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC091965.2-201ENST00000512324 613 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 RNU6-201P-201ENST00000517100 61 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-1P43699 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-1P43699 BNIP3P23-201ENST00000599655 511 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL136363.2-201ENST00000604173 851 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL451064.1-201ENST00000607718 471 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AL391497.1-201ENST00000608671 547 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC108479.2-201ENST00000617314 601 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 AC098679.4-201ENST00000624241 654 ntBASIC3.27□□□□□ -1.89
NKX2-1P43699 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms