Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC084024.2-201ENST00000503480 791 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AP003049.1-201ENST00000529418 457 ntBASIC3.23□□□□□ -1.89
SSR1P43307 OR4P1P-201ENST00000530808 1136 ntBASIC3.23□□□□□ -1.89
SSR1P43307 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.23□□□□□ -1.89
SSR1P43307 AC023043.3-201ENST00000593113 385 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.23□□□□□ -1.89
SSR1P43307 AC008739.3-201ENST00000603262 127 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.23□□□□□ -1.89
SSR1P43307 AL158211.2-201ENST00000607282 395 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 AC138932.5-201ENST00000617759 563 ntBASIC3.23□□□□□ -1.89
SSR1P43307 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AC018692.3-201ENST00000623929 123 ntBASIC3.23□□□□□ -1.89
SSR1P43307 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSR1P43307 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
SSR1P43307 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSR1P43307 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.22□□□□□ -1.89
SSR1P43307 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 MTCO1P4-201ENST00000520516 1409 ntBASIC3.22□□□□□ -1.89
SSR1P43307 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SSR1P43307 RNU6-730P-201ENST00000383954 104 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AL139098.1-201ENST00000407291 389 ntBASIC3.22□□□□□ -1.89
SSR1P43307 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 OR2AS1P-201ENST00000427827 319 ntBASIC3.22□□□□□ -1.89
SSR1P43307 SUMO1P4-201ENST00000429430 302 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 MTCYBP34-201ENST00000439552 670 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC016696.1-201ENST00000446949 318 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC009961.3-201ENST00000449832 765 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC091153.1-201ENST00000466297 402 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
SSR1P43307 RPL32P34-201ENST00000486380 400 ntBASIC3.22□□□□□ -1.89
SSR1P43307 WBP1LP4-201ENST00000505043 344 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 NAMPTP2-201ENST00000505629 1115 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC091860.1-201ENST00000505723 432 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 RN7SKP272-201ENST00000516988 232 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AP003168.1-201ENST00000530091 307 ntBASIC3.22□□□□□ -1.89
SSR1P43307 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 AL121603.1-201ENST00000553815 142 ntBASIC3.22□□□□□ -1.89
SSR1P43307 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.22□□□□□ -1.89
SSR1P43307 AC009163.5-201ENST00000575421 637 ntBASIC3.22□□□□□ -1.89
SSR1P43307 MIR4446-201ENST00000578505 67 ntBASIC3.22□□□□□ -1.89
SSR1P43307 MIR1254-2-201ENST00000579553 63 ntBASIC3.22□□□□□ -1.89
SSR1P43307 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.22□□□□□ -1.89
SSR1P43307 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.22□□□□□ -1.89
SSR1P43307 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.22□□□□□ -1.89
SSR1P43307 AC002487.1-201ENST00000604565 994 ntBASIC3.22□□□□□ -1.89
SSR1P43307 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSR1P43307 Z82195.2-201ENST00000612348 18351 ntBASIC3.22□□□□□ -1.89
SSR1P43307 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SSR1P43307 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSR1P43307 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SSR1P43307 RNU1-138P-201ENST00000384093 164 ntBASIC3.21□□□□□ -1.9
SSR1P43307 RPS4XP3-201ENST00000398541 413 ntBASIC3.21□□□□□ -1.9
SSR1P43307 RPL7P25-201ENST00000404151 721 ntBASIC3.21□□□□□ -1.9
SSR1P43307 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
SSR1P43307 RNU6-712P-201ENST00000410558 100 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AC005326.1-201ENST00000429197 123 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AL050341.1-201ENST00000447743 313 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.21□□□□□ -1.9
SSR1P43307 HMGN3P1-201ENST00000453847 193 ntBASIC3.21□□□□□ -1.9
SSR1P43307 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
SSR1P43307 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSR1P43307 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.21□□□□□ -1.9
SSR1P43307 OR10V3P-201ENST00000525712 725 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AC113192.3-201ENST00000529152 742 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AP002404.1-201ENST00000532005 451 ntBASIC3.21□□□□□ -1.9
SSR1P43307 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.21□□□□□ -1.9
SSR1P43307 MIR4429-201ENST00000580105 73 ntBASIC3.21□□□□□ -1.9
SSR1P43307 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 AC078880.5-201ENST00000617845 421 ntBASIC3.21□□□□□ -1.9
SSR1P43307 AC097372.4-201ENST00000625025 466 ntBASIC3.21□□□□□ -1.9
SSR1P43307 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.21□□□□□ -1.9
SSR1P43307 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
SSR1P43307 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
SSR1P43307 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSR1P43307 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSR1P43307 AC090740.1-201ENST00000623193 2262 ntBASIC3.2□□□□□ -1.9
SSR1P43307 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSR1P43307 AC016769.3-201ENST00000396562 315 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AL603865.2-201ENST00000401679 213 ntBASIC3.2□□□□□ -1.9
SSR1P43307 KRR1P1-201ENST00000419430 803 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.2□□□□□ -1.9
SSR1P43307 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.2□□□□□ -1.9
SSR1P43307 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.2□□□□□ -1.9
SSR1P43307 AL591503.2-201ENST00000442314 1005 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms