Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.85□□□□□ -2.11
SNCAP37840 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.84□□□□□ -2.11
SNCAP37840 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
SNCAP37840 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
SNCAP37840 HNRNPDP2-201ENST00000406475 478 ntBASIC1.84□□□□□ -2.11
SNCAP37840 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
SNCAP37840 RN7SKP140-201ENST00000411196 284 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.84□□□□□ -2.11
SNCAP37840 AC096632.1-201ENST00000427395 310 ntBASIC1.84□□□□□ -2.11
SNCAP37840 PSMA2P3-201ENST00000429685 675 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AL513175.1-201ENST00000431492 780 ntBASIC1.84□□□□□ -2.11
SNCAP37840 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.84□□□□□ -2.11
SNCAP37840 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.84□□□□□ -2.11
SNCAP37840 BX276092.4-201ENST00000452056 248 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.84□□□□□ -2.11
SNCAP37840 SETP6-201ENST00000479329 568 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC022493.1-201ENST00000492984 337 ntBASIC1.84□□□□□ -2.11
SNCAP37840 HIGD1AP3-201ENST00000515857 278 ntBASIC1.84□□□□□ -2.11
SNCAP37840 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
SNCAP37840 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.84□□□□□ -2.11
SNCAP37840 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.84□□□□□ -2.11
SNCAP37840 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.84□□□□□ -2.11
SNCAP37840 VN1R92P-201ENST00000598511 928 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC106791.2-201ENST00000604680 391 ntBASIC1.84□□□□□ -2.11
SNCAP37840 AC106028.5-201ENST00000610332 395 ntBASIC1.84□□□□□ -2.11
SNCAP37840 MIR6817-201ENST00000615588 66 ntBASIC1.84□□□□□ -2.11
SNCAP37840 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SNCAP37840 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.84□□□□□ -2.11
SNCAP37840 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.84□□□□□ -2.11
SNCAP37840 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SNCAP37840 ZNF519P1-201ENST00000449011 1626 ntBASIC1.84□□□□□ -2.12
SNCAP37840 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
SNCAP37840 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.83□□□□□ -2.12
SNCAP37840 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.83□□□□□ -2.12
SNCAP37840 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SNCAP37840 RNA5SP391-201ENST00000363456 119 ntBASIC1.83□□□□□ -2.12
SNCAP37840 RNA5SP68-201ENST00000363885 119 ntBASIC1.83□□□□□ -2.12
SNCAP37840 RNA5SP139-201ENST00000364340 117 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AL591416.1-201ENST00000404015 867 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC096664.2-201ENST00000411843 406 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNCAP37840 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.83□□□□□ -2.12
SNCAP37840 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.83□□□□□ -2.12
SNCAP37840 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 RPS15AP28-201ENST00000435088 386 ntBASIC1.83□□□□□ -2.12
SNCAP37840 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNCAP37840 HMGB1P15-201ENST00000453854 435 ntBASIC1.83□□□□□ -2.12
SNCAP37840 RPS23P3-201ENST00000470993 430 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC109486.1-201ENST00000486833 374 ntBASIC1.83□□□□□ -2.12
SNCAP37840 RPL23AP49-201ENST00000492925 468 ntBASIC1.83□□□□□ -2.12
SNCAP37840 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNCAP37840 AC234781.5-201ENST00000508429 271 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 RNA5SP148-201ENST00000516527 94 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC008083.2-201ENST00000546707 476 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.83□□□□□ -2.12
SNCAP37840 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 AC115085.1-201ENST00000588924 229 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 RPL23AP61-201ENST00000623642 466 ntBASIC1.83□□□□□ -2.12
SNCAP37840 CU459211.1-201ENST00000635667 749 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAP37840 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.83□□□□□ -2.12
SNCAP37840 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AC007342.9-201ENST00000623877 1385 ntBASIC1.83□□□□□ -2.12
SNCAP37840 AL109809.4-201ENST00000603520 2185 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AC016717.2-201ENST00000609089 5141 ntBASIC1.82□□□□□ -2.12
SNCAP37840 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAP37840 AC062016.1-201ENST00000355719 319 ntBASIC1.82□□□□□ -2.12
SNCAP37840 MIR208A-201ENST00000362287 71 ntBASIC1.82□□□□□ -2.12
SNCAP37840 Y_RNA.333-201ENST00000365274 102 ntBASIC1.82□□□□□ -2.12
SNCAP37840 MIR518C-201ENST00000384822 101 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AC073264.1-201ENST00000411508 416 ntBASIC1.82□□□□□ -2.12
SNCAP37840 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.82□□□□□ -2.12
SNCAP37840 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.82□□□□□ -2.12
SNCAP37840 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAP37840 RABEPKP1-201ENST00000440529 1026 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.82□□□□□ -2.12
SNCAP37840 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAP37840 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.82□□□□□ -2.12
SNCAP37840 AC025768.1-201ENST00000510057 267 ntBASIC1.82□□□□□ -2.12
SNCAP37840 RAC1P5-201ENST00000512182 576 ntBASIC1.82□□□□□ -2.12
SNCAP37840 RNU1-40P-201ENST00000516816 164 ntBASIC1.82□□□□□ -2.12
SNCAP37840 RNU1-97P-201ENST00000516872 164 ntBASIC1.82□□□□□ -2.12
SNCAP37840 RPL7P20-201ENST00000520308 745 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.82□□□□□ -2.12
SNCAP37840 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.82□□□□□ -2.12
SNCAP37840 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.82□□□□□ -2.12
SNCAP37840 MTND4LP24-201ENST00000572277 291 ntBASIC1.82□□□□□ -2.12
SNCAP37840 RPS3AP23-202ENST00000574601 686 ntBASIC1.82□□□□□ -2.12
SNCAP37840 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.82□□□□□ -2.12
SNCAP37840 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.82□□□□□ -2.12
SNCAP37840 AC055764.2-201ENST00000610089 670 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AC009090.3-201ENST00000616553 565 ntBASIC1.82□□□□□ -2.12
SNCAP37840 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms