Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL589994.2-201ENST00000621124 579 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 AC114774.1-201ENST00000507410 1770 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 AL442639.1-201ENST00000625030 1899 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC12P31275 AL139811.1-201ENST00000424779 2299 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 Y_RNA.162-201ENST00000363683 102 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 U3.10-201ENST00000364459 214 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 RNU1-106P-201ENST00000384382 164 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 SNORA67-201ENST00000384423 137 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 Y_RNA.530-201ENST00000384587 101 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 RPL7P46-201ENST00000425129 740 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 MTCO3P45-201ENST00000443036 613 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 MTND4P17-201ENST00000470444 350 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC010631.1-201ENST00000474150 156 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 AC022133.1-201ENST00000490961 571 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 RNU6-1095P-201ENST00000516148 108 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 RNU6-390P-201ENST00000516259 103 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 AC109635.4-202ENST00000531666 412 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL137161.1-201ENST00000532231 390 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 MIR5583-1-201ENST00000580941 59 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 HMGB2P1-201ENST00000591146 634 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC006116.3-201ENST00000592968 361 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.6-201ENST00000603753 252 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.11-201ENST00000604059 253 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC008162.1-201ENST00000604718 254 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.1-201ENST00000604752 252 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.5-201ENST00000605253 252 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.12-201ENST00000605291 253 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.8-201ENST00000605353 252 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 CTHRC1P1-201ENST00000605383 469 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AL670379.7-201ENST00000605823 252 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 AC110801.1-201ENST00000623590 212 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC12P31275 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
HOXC12P31275 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.75□□□□□ -1.65
HOXC12P31275 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC12P31275 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HOXC12P31275 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HOXC12P31275 AL356489.2-201ENST00000566968 3528 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC12P31275 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 AP001350.1-201ENST00000601906 1524 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 U3.2-201ENST00000362981 210 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 RNA5SP335-201ENST00000363817 110 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 Y_RNA.301-201ENST00000364990 103 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 Y_RNA.414-201ENST00000384011 101 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 RNU6-1013P-201ENST00000384180 107 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 RNU6-712P-201ENST00000410558 100 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 RPL30P2-201ENST00000414021 291 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 SRSF1P1-201ENST00000424058 520 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC12P31275 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC12P31275 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC12P31275 HMGB3P11-201ENST00000440127 604 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 GAPDHP25-201ENST00000447061 1001 ntBASIC4.74□□□□□ -1.65
HOXC12P31275 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms