Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 U6.105-201ENST00000637379 88 ntBASIC2.57□□□□□ -2
CD40LGP29965 OR5BR1P-201ENST00000524992 1330 ntBASIC2.57□□□□□ -2
CD40LGP29965 MTCO1P6-201ENST00000481192 1384 ntBASIC2.57□□□□□ -2
CD40LGP29965 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 RNU4-47P-201ENST00000410876 114 ntBASIC2.56□□□□□ -2
CD40LGP29965 RPL7P8-201ENST00000411964 730 ntBASIC2.56□□□□□ -2
CD40LGP29965 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.56□□□□□ -2
CD40LGP29965 KRR1P1-201ENST00000419430 803 ntBASIC2.56□□□□□ -2
CD40LGP29965 AL158156.1-201ENST00000422509 473 ntBASIC2.56□□□□□ -2
CD40LGP29965 RPL27AP8-201ENST00000424277 446 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC234781.2-201ENST00000426370 994 ntBASIC2.56□□□□□ -2
CD40LGP29965 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.56□□□□□ -2
CD40LGP29965 MTND4LP10-201ENST00000435146 291 ntBASIC2.56□□□□□ -2
CD40LGP29965 RPL23AP74-201ENST00000437246 471 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.56□□□□□ -2
CD40LGP29965 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 TRBV26-201ENST00000456572 344 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC092798.1-201ENST00000458542 409 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC074250.1-201ENST00000511117 192 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 RNU6-1095P-201ENST00000516148 108 ntBASIC2.56□□□□□ -2
CD40LGP29965 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.56□□□□□ -2
CD40LGP29965 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.56□□□□□ -2
CD40LGP29965 PRELID3BP8-201ENST00000604148 295 ntBASIC2.56□□□□□ -2
CD40LGP29965 AC010738.1-201ENST00000604970 987 ntBASIC2.56□□□□□ -2
CD40LGP29965 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.56□□□□□ -2
CD40LGP29965 BX664608.1-201ENST00000610519 487 ntBASIC2.56□□□□□ -2
CD40LGP29965 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 AC027309.3-201ENST00000623419 351 ntBASIC2.56□□□□□ -2
CD40LGP29965 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.56□□□□□ -2
CD40LGP29965 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
CD40LGP29965 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
CD40LGP29965 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD40LGP29965 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.55□□□□□ -2
CD40LGP29965 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD40LGP29965 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.55□□□□□ -2
CD40LGP29965 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
CD40LGP29965 U3.29-201ENST00000391296 212 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.55□□□□□ -2
CD40LGP29965 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.55□□□□□ -2
CD40LGP29965 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.55□□□□□ -2
CD40LGP29965 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.55□□□□□ -2
CD40LGP29965 AC093422.3-201ENST00000428506 305 ntBASIC2.55□□□□□ -2
CD40LGP29965 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.55□□□□□ -2
CD40LGP29965 RNF2P1-201ENST00000442955 1010 ntBASIC2.55□□□□□ -2
CD40LGP29965 RPS26P30-201ENST00000443431 335 ntBASIC2.55□□□□□ -2
CD40LGP29965 AL589880.1-201ENST00000448271 287 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC104978.1-201ENST00000449387 391 ntBASIC2.55□□□□□ -2
CD40LGP29965 AL109741.2-201ENST00000455561 343 ntBASIC2.55□□□□□ -2
CD40LGP29965 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.55□□□□□ -2
CD40LGP29965 OR52A4P-203ENST00000498233 1014 ntBASIC2.55□□□□□ -2
CD40LGP29965 NUP58P1-201ENST00000502546 1738 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC091917.2-201ENST00000505002 744 ntBASIC2.55□□□□□ -2
CD40LGP29965 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.55□□□□□ -2
CD40LGP29965 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.55□□□□□ -2
CD40LGP29965 RN7SKP272-201ENST00000516988 232 ntBASIC2.55□□□□□ -2
CD40LGP29965 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
CD40LGP29965 OR4P1P-201ENST00000530808 1136 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.55□□□□□ -2
CD40LGP29965 AC007458.1-201ENST00000542812 373 ntBASIC2.55□□□□□ -2
CD40LGP29965 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.55□□□□□ -2
CD40LGP29965 AC025918.2-201ENST00000558683 763 ntBASIC2.55□□□□□ -2
CD40LGP29965 RPL21P12-201ENST00000559810 515 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC011260.1-201ENST00000578420 472 ntBASIC2.55□□□□□ -2
CD40LGP29965 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
CD40LGP29965 MIR4444-1-201ENST00000581696 74 ntBASIC2.55□□□□□ -2
CD40LGP29965 MIR4444-2-201ENST00000584390 74 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
CD40LGP29965 CKS1BP3-201ENST00000600888 237 ntBASIC2.55□□□□□ -2
CD40LGP29965 SRGNP1-201ENST00000603392 451 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC012443.1-201ENST00000605605 231 ntBASIC2.55□□□□□ -2
CD40LGP29965 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.55□□□□□ -2
CD40LGP29965 AL161629.2-201ENST00000615347 275 ntBASIC2.55□□□□□ -2
CD40LGP29965 SNHG22-203ENST00000617833 660 ntBASIC2.55□□□□□ -2
CD40LGP29965 AC091953.5-201ENST00000622919 233 ntBASIC2.55□□□□□ -2
CD40LGP29965 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
CD40LGP29965 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD40LGP29965 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD40LGP29965 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
CD40LGP29965 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
CD40LGP29965 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD40LGP29965 SNORD15B-201ENST00000384714 146 ntBASIC2.54□□□□□ -2
CD40LGP29965 MIR490-201ENST00000384865 128 ntBASIC2.54□□□□□ -2
CD40LGP29965 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
CD40LGP29965 AL512633.1-201ENST00000399931 655 ntBASIC2.54□□□□□ -2
CD40LGP29965 AL353692.2-201ENST00000407054 335 ntBASIC2.54□□□□□ -2
CD40LGP29965 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.54□□□□□ -2
CD40LGP29965 AL451062.2-201ENST00000427515 271 ntBASIC2.54□□□□□ -2
CD40LGP29965 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.54□□□□□ -2
CD40LGP29965 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD40LGP29965 AC109925.1-201ENST00000478069 331 ntBASIC2.54□□□□□ -2
CD40LGP29965 AL358832.1-201ENST00000497800 389 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms