Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC068313.1-201ENST00000604028 1008 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL163642.2-201ENST00000604722 1019 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC018714.1-201ENST00000605028 208 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL159169.3-201ENST00000608871 561 ntBASIC3.58□□□□□ -1.84
CDH3P22223 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.58□□□□□ -1.84
CDH3P22223 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC079684.1-201ENST00000621405 437 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC018816.2-201ENST00000621460 353 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC231657.1-201ENST00000624313 397 ntBASIC3.58□□□□□ -1.84
CDH3P22223 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH3P22223 GDI2P1-201ENST00000429312 1336 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
CDH3P22223 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 OR4G11P-202ENST00000642116 1414 ntBASIC3.58□□□□□ -1.84
CDH3P22223 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH3P22223 AC092326.2-201ENST00000624772 1561 ntBASIC3.58□□□□□ -1.84
CDH3P22223 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CDH3P22223 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDH3P22223 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH3P22223 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 RPL31P1-201ENST00000398116 372 ntBASIC3.57□□□□□ -1.84
CDH3P22223 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.57□□□□□ -1.84
CDH3P22223 MTND4LP20-201ENST00000402379 270 ntBASIC3.57□□□□□ -1.84
CDH3P22223 HMGB1P17-201ENST00000403495 628 ntBASIC3.57□□□□□ -1.84
CDH3P22223 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 AL356131.1-201ENST00000405826 414 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH3P22223 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AL591503.2-201ENST00000442314 1005 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 USP9YP10-201ENST00000454868 628 ntBASIC3.57□□□□□ -1.84
CDH3P22223 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
CDH3P22223 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
CDH3P22223 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH3P22223 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 PCBP2P3-201ENST00000509726 843 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC104619.4-201ENST00000510773 249 ntBASIC3.57□□□□□ -1.84
CDH3P22223 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 AC026403.1-201ENST00000518938 295 ntBASIC3.57□□□□□ -1.84
CDH3P22223 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH3P22223 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.57□□□□□ -1.84
CDH3P22223 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH3P22223 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 GTF2IP22-201ENST00000554443 182 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC006960.3-201ENST00000561845 705 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC074050.1-201ENST00000563247 211 ntBASIC3.57□□□□□ -1.84
CDH3P22223 ISCA1P3-201ENST00000577104 373 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC020914.6-201ENST00000594327 272 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH3P22223 AC008739.3-201ENST00000603262 127 ntBASIC3.57□□□□□ -1.84
CDH3P22223 BNIP3P11-201ENST00000603878 563 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AL590282.1-201ENST00000610379 1136 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC025588.4-201ENST00000615802 908 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC073968.1-201ENST00000618594 637 ntBASIC3.57□□□□□ -1.84
CDH3P22223 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH3P22223 AC068057.2-201ENST00000624047 895 ntBASIC3.57□□□□□ -1.84
CDH3P22223 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 SNORA50A-202ENST00000629536 136 ntBASIC3.57□□□□□ -1.84
CDH3P22223 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH3P22223 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH3P22223 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH3P22223 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
CDH3P22223 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH3P22223 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH3P22223 SNORA73.2-201ENST00000364946 201 ntBASIC3.56□□□□□ -1.84
CDH3P22223 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
CDH3P22223 CYCSP45-201ENST00000402289 315 ntBASIC3.56□□□□□ -1.84
CDH3P22223 RNU4-72P-201ENST00000410754 173 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH3P22223 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 MTND4P6-201ENST00000438297 472 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH3P22223 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH3P22223 EEF1E1P1-201ENST00000446998 430 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms