Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCNA3P22001 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
KCNA3P22001 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCNA3P22001 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 UBA52P6-201ENST00000399822 382 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.59□□□□□ -1.67
KCNA3P22001 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 MTND5P28-201ENST00000438005 1594 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC105402.2-201ENST00000438503 358 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNA3P22001 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCNA3P22001 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
KCNA3P22001 TRBV26-201ENST00000456572 344 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 RPL7P24-201ENST00000493052 752 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 AC108941.1-201ENST00000502853 530 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNA3P22001 PHBP14-201ENST00000512887 367 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC010342.1-201ENST00000514047 877 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC025881.1-201ENST00000518851 512 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 AL139174.1-201ENST00000531489 886 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.59□□□□□ -1.67
KCNA3P22001 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
KCNA3P22001 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 AP005205.1-201ENST00000563503 508 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC090337.1-201ENST00000579651 2074 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 MIR548AB-201ENST00000584917 84 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC112187.2-201ENST00000604345 283 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.59□□□□□ -1.67
KCNA3P22001 AC087241.4-201ENST00000612441 480 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 Z99129.1-201ENST00000612510 255 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 RMST_9.1-201ENST00000619945 193 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.59□□□□□ -1.67
KCNA3P22001 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.67
KCNA3P22001 U6.101-201ENST00000637707 76 ntBASIC4.59□□□□□ -1.67
KCNA3P22001 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
KCNA3P22001 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.59□□□□□ -1.68
KCNA3P22001 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
KCNA3P22001 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
KCNA3P22001 AL035425.3-201ENST00000564206 4996 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 BDP1P-201ENST00000582658 1990 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 AP002907.1-201ENST00000606361 1430 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 Y_RNA.3-201ENST00000362331 103 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 SNORA51.6-201ENST00000384151 125 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 RNU6-1042P-201ENST00000384204 107 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 RNU6-1215P-201ENST00000384441 102 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 MIR320C1-201ENST00000408566 88 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 RN7SKP56-201ENST00000410513 331 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNA3P22001 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNA3P22001 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 RPL21P32-201ENST00000419877 477 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 C8orf59P1-201ENST00000429930 303 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 ARPC3P5-201ENST00000448802 534 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNA3P22001 AL121877.1-201ENST00000453704 622 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 AC026410.2-201ENST00000460281 156 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNA3P22001 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNA3P22001 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNA3P22001 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNA3P22001 MTND1P5-201ENST00000517906 940 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.58□□□□□ -1.68
KCNA3P22001 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNA3P22001 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.58□□□□□ -1.68
KCNA3P22001 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.58□□□□□ -1.68
KCNA3P22001 AL133457.1-201ENST00000564251 987 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 EIF1P4-201ENST00000572664 335 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 MTND1P15-201ENST00000579262 949 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.58□□□□□ -1.68
KCNA3P22001 BNIP3P23-201ENST00000599655 511 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 AP000403.1-201ENST00000603349 851 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 AC103710.4-201ENST00000609301 899 ntBASIC4.58□□□□□ -1.68
KCNA3P22001 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
KCNA3P22001 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KCNA3P22001 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KCNA3P22001 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.57□□□□□ -1.68
KCNA3P22001 AC027514.1-201ENST00000588561 1603 ntBASIC4.57□□□□□ -1.68
KCNA3P22001 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KCNA3P22001 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms