Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 SDCBPP3-201ENST00000419629 891 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.38□□□□□ -2.03
COL5A1P20908 AL606490.7-201ENST00000433136 191 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 Z80107.1-201ENST00000436830 412 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.38□□□□□ -2.03
COL5A1P20908 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 MOB1AP2-201ENST00000446060 614 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 GSTA11P-201ENST00000452866 669 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 OFD1P3Y-201ENST00000453312 783 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AL645939.1-201ENST00000453429 797 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC087385.1-201ENST00000475062 312 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 RPL23AP45-201ENST00000476406 468 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.38□□□□□ -2.03
COL5A1P20908 TRAV31-201ENST00000502780 342 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC108471.1-201ENST00000513977 287 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 SNORD116-26-201ENST00000516006 96 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AP001207.1-201ENST00000524051 481 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
COL5A1P20908 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 RPL23AP84-201ENST00000571193 464 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 TPMTP1-201ENST00000592307 737 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC091057.3-201ENST00000602684 733 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC012531.5-201ENST00000611375 151 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC009318.3-201ENST00000616916 503 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 AC110792.3-201ENST00000595906 1614 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.38□□□□□ -2.03
COL5A1P20908 RPL21P132-201ENST00000331267 462 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 RNU6-253P-201ENST00000384730 105 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AL450338.1-201ENST00000407987 512 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AL592045.1-201ENST00000429867 352 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC104389.3-201ENST00000445629 235 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AP002345.1-201ENST00000456493 928 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC104164.3-201ENST00000467363 1258 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 RPL36AP51-201ENST00000487216 318 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC008427.1-201ENST00000503102 655 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC121161.1-201ENST00000510606 652 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 RNU6-334P-201ENST00000517072 102 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AP003355.1-201ENST00000518956 587 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 OR4A45P-201ENST00000529954 901 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 OR7K1P-201ENST00000546439 926 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC123786.2-201ENST00000603459 275 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AP000942.3-201ENST00000603702 160 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AC091488.1-201ENST00000604239 660 ntBASIC2.38□□□□□ -2.03
COL5A1P20908 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL5A1P20908 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.38□□□□□ -2.03
COL5A1P20908 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 AL359715.4-201ENST00000606629 1436 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 Y_RNA.269-201ENST00000364685 89 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 RNU6-603P-201ENST00000411403 107 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 USP9YP20-201ENST00000419224 558 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 MTND4LP13-201ENST00000425022 298 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 RPL36AP6-201ENST00000435770 321 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 AL627224.1-201ENST00000448334 444 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 RPL23AP44-201ENST00000482216 473 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.37□□□□□ -2.03
COL5A1P20908 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.37□□□□□ -2.03
COL5A1P20908 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL5A1P20908 AC018630.1-201ENST00000541376 925 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms