Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPP40P2-201ENST00000603596 712 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 AC010678.1-201ENST00000614118 713 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 MIR8070-201ENST00000616510 88 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP2AP11388 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP2AP11388 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP2AP11388 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TOP2AP11388 AL157827.1-201ENST00000447622 132 ntBASIC3.26□□□□□ -1.89
TOP2AP11388 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TOP2AP11388 RNU6-1053P-201ENST00000515930 101 ntBASIC3.26□□□□□ -1.89
TOP2AP11388 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2AP11388 AL356280.1-201ENST00000603614 379 ntBASIC3.26□□□□□ -1.89
TOP2AP11388 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2AP11388 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TOP2AP11388 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.25□□□□□ -1.89
TOP2AP11388 CR769767.1-201ENST00000436337 346 ntBASIC3.25□□□□□ -1.89
TOP2AP11388 ELOCP13-201ENST00000443934 329 ntBASIC3.25□□□□□ -1.89
TOP2AP11388 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.25□□□□□ -1.89
TOP2AP11388 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP2AP11388 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP2AP11388 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP2AP11388 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TOP2AP11388 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TOP2AP11388 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TOP2AP11388 MIR378A-201ENST00000362177 66 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.24□□□□□ -1.89
TOP2AP11388 YWHAZP7-201ENST00000436906 631 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.24□□□□□ -1.89
TOP2AP11388 RPS3AP23-202ENST00000574601 686 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 AC103810.1-201ENST00000579873 453 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.24□□□□□ -1.89
TOP2AP11388 AC012531.5-201ENST00000611375 151 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 MFSD8-245ENST00000641743 948 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 RNU2-20P-201ENST00000410425 191 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
TOP2AP11388 RNA5SP309-201ENST00000516670 106 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 RNU6-84P-201ENST00000607737 102 ntBASIC3.24□□□□□ -1.89
TOP2AP11388 HIGD1AP11-201ENST00000438361 280 ntBASIC3.23□□□□□ -1.89
TOP2AP11388 AC025033.1-201ENST00000463883 194 ntBASIC3.23□□□□□ -1.89
TOP2AP11388 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.23□□□□□ -1.89
TOP2AP11388 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
TOP2AP11388 AC007687.1-201ENST00000602704 304 ntBASIC3.23□□□□□ -1.89
TOP2AP11388 XIST_intron.1-201ENST00000619444 68 ntBASIC3.23□□□□□ -1.89
TOP2AP11388 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TOP2AP11388 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TOP2AP11388 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TOP2AP11388 RNA5SP338-201ENST00000410495 85 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.22□□□□□ -1.89
TOP2AP11388 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.22□□□□□ -1.89
TOP2AP11388 VN1R48P-201ENST00000448149 1036 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 AL021397.1-201ENST00000451806 248 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 RNU6-717P-201ENST00000459076 104 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 AC107393.1-201ENST00000512403 346 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.22□□□□□ -1.89
TOP2AP11388 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.22□□□□□ -1.89
TOP2AP11388 OR4U1P-201ENST00000554958 912 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TOP2AP11388 MAGOH2P-202ENST00000584384 429 ntBASIC3.22□□□□□ -1.89
TOP2AP11388 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.22□□□□□ -1.89
TOP2AP11388 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TOP2AP11388 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TOP2AP11388 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TOP2AP11388 MTND5P23-201ENST00000430812 1655 ntBASIC3.21□□□□□ -1.89
TOP2AP11388 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.21□□□□□ -1.89
TOP2AP11388 AL021407.1-201ENST00000404531 386 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 AP1B1P2-201ENST00000416196 106 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 FNDC3CP-201ENST00000420795 1155 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 AC005517.2-201ENST00000424673 553 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.21□□□□□ -1.9
TOP2AP11388 AC104564.1-201ENST00000493028 407 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.21□□□□□ -1.9
TOP2AP11388 MIR4781-201ENST00000585250 76 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.21□□□□□ -1.9
TOP2AP11388 AC091488.1-201ENST00000604239 660 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 AL359821.1-201ENST00000605519 182 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.21□□□□□ -1.9
TOP2AP11388 DCAF13P3-201ENST00000561147 1334 ntBASIC3.21□□□□□ -1.9
TOP2AP11388 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TOP2AP11388 RPL23AP39-201ENST00000415533 405 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 EIF1AXP1-201ENST00000419267 435 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 AC027673.1-201ENST00000456245 405 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.2□□□□□ -1.9
TOP2AP11388 FABP5P6-201ENST00000510588 409 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 AC008126.1-201ENST00000549019 480 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 DNAJC19P9-201ENST00000555084 351 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 GMCL1P2-201ENST00000605230 823 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.2□□□□□ -1.9
TOP2AP11388 AL355578.1-201ENST00000607405 1328 ntBASIC3.2□□□□□ -1.9
TOP2AP11388 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TOP2AP11388 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP2AP11388 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 RPS27P5-201ENST00000444247 244 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 RPL7P5-201ENST00000471472 736 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 ATG10-AS1-201ENST00000504846 648 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 AC010265.1-201ENST00000513509 211 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 SNORA25.15-201ENST00000516487 89 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TOP2AP11388 CBX3P4-201ENST00000538909 354 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 AC067805.1-201ENST00000559344 470 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms