Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
FREM3P0C091 RNA5SP508-201ENST00000411327 119 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 OR51A3P-201ENST00000413596 924 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 RPL23AP39-201ENST00000415533 405 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 HMGB1P18-201ENST00000438801 619 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 RPL21P2-201ENST00000440049 481 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.05□□□□□ -2.08
FREM3P0C091 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.05□□□□□ -2.08
FREM3P0C091 RPL23AP23-201ENST00000452590 471 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 RPL36AP51-201ENST00000487216 318 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.05□□□□□ -2.08
FREM3P0C091 AC111193.1-201ENST00000504097 155 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AC008837.1-201ENST00000511513 412 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.05□□□□□ -2.08
FREM3P0C091 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.05□□□□□ -2.08
FREM3P0C091 AP001646.1-201ENST00000527936 915 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AC009063.1-201ENST00000563342 702 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.05□□□□□ -2.08
FREM3P0C091 AC025754.2-201ENST00000606491 432 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AC110994.2-201ENST00000635481 492 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 FAM157B-203ENST00000639350 358 ntBASIC2.05□□□□□ -2.08
FREM3P0C091 AL136164.4-201ENST00000625013 2135 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FREM3P0C091 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FREM3P0C091 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.04□□□□□ -2.08
FREM3P0C091 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.04□□□□□ -2.08
FREM3P0C091 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
FREM3P0C091 LINC00888-204ENST00000487386 421 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.04□□□□□ -2.08
FREM3P0C091 AC107222.1-201ENST00000510899 637 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 TTC39CP1-201ENST00000512513 755 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 ATP5F1P7-201ENST00000567330 760 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 MIR3690-201ENST00000580266 75 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 AC060766.3-201ENST00000591442 263 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 AC090425.2-201ENST00000608818 501 ntBASIC2.04□□□□□ -2.08
FREM3P0C091 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.04□□□□□ -2.08
FREM3P0C091 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.04□□□□□ -2.08
FREM3P0C091 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
FREM3P0C091 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.04□□□□□ -2.08
FREM3P0C091 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.04□□□□□ -2.08
FREM3P0C091 ATF1P1-201ENST00000406040 927 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 RPL23AP47-201ENST00000408017 460 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 NUP35P2-201ENST00000416748 943 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 Z98742.2-201ENST00000431564 187 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 UBL5P3-201ENST00000475112 231 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 RPL23AP49-201ENST00000492925 468 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL024509.2-201ENST00000493462 493 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 GTF2IP9-201ENST00000502460 301 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.03□□□□□ -2.08
FREM3P0C091 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.03□□□□□ -2.08
FREM3P0C091 IGKV2-36-201ENST00000519999 223 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.03□□□□□ -2.08
FREM3P0C091 OR4V1P-201ENST00000525394 1140 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AP000873.5-201ENST00000533906 236 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 MTCO3P24-201ENST00000572729 782 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 VN1R78P-201ENST00000597393 564 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 DUXAP3-201ENST00000603616 594 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.03□□□□□ -2.08
FREM3P0C091 AL590410.1-201ENST00000617925 333 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL356266.1-201ENST00000623311 483 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL160394.1-201ENST00000624765 724 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.03□□□□□ -2.08
FREM3P0C091 GSTA9P-201ENST00000406231 611 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.03□□□□□ -2.08
FREM3P0C091 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.03□□□□□ -2.08
FREM3P0C091 RPL7P46-201ENST00000425129 740 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AC129850.1-201ENST00000436203 508 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 snoU13.7-201ENST00000459220 104 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 GAPDHP39-201ENST00000481866 979 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AC104090.1-201ENST00000506341 1171 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
FREM3P0C091 AP003467.2-201ENST00000520175 319 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 SYF2P1-201ENST00000550658 413 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL442163.2-201ENST00000553912 710 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.03□□□□□ -2.08
FREM3P0C091 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.03□□□□□ -2.08
FREM3P0C091 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL158827.2-201ENST00000602494 330 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 AL691447.3-201ENST00000635020 330 ntBASIC2.03□□□□□ -2.08
FREM3P0C091 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.09
FREM3P0C091 AL512283.1-201ENST00000606756 1384 ntBASIC2.03□□□□□ -2.09
FREM3P0C091 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
FREM3P0C091 AC073055.1-201ENST00000456901 1621 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FREM3P0C091 RPL21P132-201ENST00000331267 462 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 RNA5SP391-201ENST00000363456 119 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
FREM3P0C091 HMGB1P11-201ENST00000413899 637 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AL513477.1-202ENST00000417061 214 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.02□□□□□ -2.09
FREM3P0C091 USP9YP8-201ENST00000441913 500 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.02□□□□□ -2.09
FREM3P0C091 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.02□□□□□ -2.09
FREM3P0C091 AC109635.4-202ENST00000531666 412 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AC107954.1-201ENST00000565906 727 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms