Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
HOXC4P09017 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC4P09017 AC139713.2-210ENST00000641741 992 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC4P09017 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HOXC4P09017 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC4P09017 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC4P09017 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC4P09017 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC4P09017 AL359893.1-201ENST00000447628 1580 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
HOXC4P09017 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
HOXC4P09017 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3□□□□□ -1.93
HOXC4P09017 RPL7P26-201ENST00000333817 754 ntBASIC3□□□□□ -1.93
HOXC4P09017 RNA5SP383-201ENST00000362934 120 ntBASIC3□□□□□ -1.93
HOXC4P09017 RNU6-444P-201ENST00000383988 108 ntBASIC3□□□□□ -1.93
HOXC4P09017 TAS2R15P-201ENST00000390674 928 ntBASIC3□□□□□ -1.93
HOXC4P09017 SNORD65C-201ENST00000390962 71 ntBASIC3□□□□□ -1.93
HOXC4P09017 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3□□□□□ -1.93
HOXC4P09017 SDCBPP3-201ENST00000419629 891 ntBASIC3□□□□□ -1.93
HOXC4P09017 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3□□□□□ -1.93
HOXC4P09017 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3□□□□□ -1.93
HOXC4P09017 GTF2IP3-201ENST00000433887 494 ntBASIC3□□□□□ -1.93
HOXC4P09017 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3□□□□□ -1.93
HOXC4P09017 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3□□□□□ -1.93
HOXC4P09017 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3□□□□□ -1.93
HOXC4P09017 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3□□□□□ -1.93
HOXC4P09017 GTF2IP12-201ENST00000456547 356 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3□□□□□ -1.93
HOXC4P09017 RPS27P23-201ENST00000487608 251 ntBASIC3□□□□□ -1.93
HOXC4P09017 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
HOXC4P09017 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC4P09017 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3□□□□□ -1.93
HOXC4P09017 RN7SKP244-201ENST00000516513 307 ntBASIC3□□□□□ -1.93
HOXC4P09017 RNU6-1028P-201ENST00000517164 93 ntBASIC3□□□□□ -1.93
HOXC4P09017 MRPS36P3-201ENST00000519284 130 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3□□□□□ -1.93
HOXC4P09017 AC022080.3-201ENST00000544433 482 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC107016.2-201ENST00000547968 190 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3□□□□□ -1.93
HOXC4P09017 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3□□□□□ -1.93
HOXC4P09017 AC009097.3-201ENST00000563557 1018 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC107954.1-201ENST00000565906 727 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC023824.3-201ENST00000569003 562 ntBASIC3□□□□□ -1.93
HOXC4P09017 AL451007.1-201ENST00000595491 289 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC107952.2-201ENST00000606048 486 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC097065.2-201ENST00000608159 533 ntBASIC3□□□□□ -1.93
HOXC4P09017 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3□□□□□ -1.93
HOXC4P09017 AL451074.6-201ENST00000608512 729 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC097478.2-201ENST00000610572 514 ntBASIC3□□□□□ -1.93
HOXC4P09017 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3□□□□□ -1.93
HOXC4P09017 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3□□□□□ -1.93
HOXC4P09017 AC092184.1-201ENST00000625042 715 ntBASIC3□□□□□ -1.93
HOXC4P09017 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC4P09017 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HOXC4P09017 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
HOXC4P09017 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HOXC4P09017 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC4P09017 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 AP001350.1-201ENST00000601906 1524 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXC4P09017 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HOXC4P09017 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HOXC4P09017 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
HOXC4P09017 Y_RNA.472-201ENST00000384322 102 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 RNU6-837P-201ENST00000391056 108 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 RNU6-932P-201ENST00000391108 106 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC245291.1-201ENST00000419501 328 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC006960.1-201ENST00000419980 153 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXC4P09017 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 RPL7P34-201ENST00000433316 712 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 B3GNT2P1-201ENST00000434960 952 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC092170.1-201ENST00000440211 356 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 CR769776.1-201ENST00000441254 787 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 Z73417.1-201ENST00000447373 778 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC112492.1-201ENST00000449607 712 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXC4P09017 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC092754.2-201ENST00000463506 460 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 RPL23AP55-201ENST00000498163 452 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXC4P09017 AC026414.1-201ENST00000504046 698 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms