Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 OR6C7P-201ENST00000547875 934 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.49□□□□□ -1.85
VIMP08670 DUXAP1-201ENST00000556632 463 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.49□□□□□ -1.85
VIMP08670 BNIP3P5-201ENST00000562290 498 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 VN1R82P-201ENST00000601481 356 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL592221.1-201ENST00000605266 382 ntBASIC3.49□□□□□ -1.85
VIMP08670 AL133507.1-201ENST00000605269 557 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC005962.2-201ENST00000611427 652 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC019176.2-201ENST00000611579 315 ntBASIC3.49□□□□□ -1.85
VIMP08670 MIR6500-201ENST00000622700 86 ntBASIC3.49□□□□□ -1.85
VIMP08670 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.49□□□□□ -1.85
VIMP08670 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.49□□□□□ -1.85
VIMP08670 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
VIMP08670 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.49□□□□□ -1.85
VIMP08670 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.49□□□□□ -1.85
VIMP08670 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VIMP08670 RPL7P26-201ENST00000333817 754 ntBASIC3.48□□□□□ -1.85
VIMP08670 RPL21P65-201ENST00000406094 466 ntBASIC3.48□□□□□ -1.85
VIMP08670 SNORA3.3-201ENST00000408712 125 ntBASIC3.48□□□□□ -1.85
VIMP08670 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.48□□□□□ -1.85
VIMP08670 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.48□□□□□ -1.85
VIMP08670 BEND7P1-201ENST00000422058 457 ntBASIC3.48□□□□□ -1.85
VIMP08670 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 RAC1P7-201ENST00000445367 377 ntBASIC3.48□□□□□ -1.85
VIMP08670 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VIMP08670 MTND1P31-201ENST00000449206 961 ntBASIC3.48□□□□□ -1.85
VIMP08670 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.48□□□□□ -1.85
VIMP08670 AC093278.1-201ENST00000494700 600 ntBASIC3.48□□□□□ -1.85
VIMP08670 AC093663.1-201ENST00000497190 394 ntBASIC3.48□□□□□ -1.85
VIMP08670 AC017037.2-201ENST00000513850 890 ntBASIC3.48□□□□□ -1.85
VIMP08670 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.48□□□□□ -1.85
VIMP08670 RN7SKP13-201ENST00000515933 244 ntBASIC3.48□□□□□ -1.85
VIMP08670 COX6CP8-201ENST00000522620 226 ntBASIC3.48□□□□□ -1.85
VIMP08670 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VIMP08670 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.48□□□□□ -1.85
VIMP08670 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.48□□□□□ -1.85
VIMP08670 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.48□□□□□ -1.85
VIMP08670 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.48□□□□□ -1.85
VIMP08670 MIR4506-201ENST00000584693 77 ntBASIC3.48□□□□□ -1.85
VIMP08670 BDH2P1-201ENST00000602288 736 ntBASIC3.48□□□□□ -1.85
VIMP08670 AC112220.3-201ENST00000605502 502 ntBASIC3.48□□□□□ -1.85
VIMP08670 AC005344.1-201ENST00000613391 459 ntBASIC3.48□□□□□ -1.85
VIMP08670 AP002782.1-201ENST00000623107 614 ntBASIC3.48□□□□□ -1.85
VIMP08670 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.48□□□□□ -1.85
VIMP08670 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
VIMP08670 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 SNORA4.1-201ENST00000364263 144 ntBASIC3.47□□□□□ -1.85
VIMP08670 Y_RNA.234-201ENST00000364409 97 ntBASIC3.47□□□□□ -1.85
VIMP08670 Y_RNA.548-201ENST00000384656 105 ntBASIC3.47□□□□□ -1.85
VIMP08670 RNU6-882P-201ENST00000391025 103 ntBASIC3.47□□□□□ -1.85
VIMP08670 RNU1-101P-201ENST00000391171 127 ntBASIC3.47□□□□□ -1.85
VIMP08670 SAR1AP2-201ENST00000392696 594 ntBASIC3.47□□□□□ -1.85
VIMP08670 RNU6-628P-201ENST00000410675 107 ntBASIC3.47□□□□□ -1.85
VIMP08670 AC016769.2-201ENST00000414815 475 ntBASIC3.47□□□□□ -1.85
VIMP08670 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
VIMP08670 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 USP9YP10-201ENST00000454868 628 ntBASIC3.47□□□□□ -1.85
VIMP08670 RPL21P8-201ENST00000465083 535 ntBASIC3.47□□□□□ -1.85
VIMP08670 RPL7P19-201ENST00000469948 618 ntBASIC3.47□□□□□ -1.85
VIMP08670 NDUFA5P9-201ENST00000472609 340 ntBASIC3.47□□□□□ -1.85
VIMP08670 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.47□□□□□ -1.85
VIMP08670 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 AC105914.1-201ENST00000511798 226 ntBASIC3.47□□□□□ -1.85
VIMP08670 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 RNA5SP385-201ENST00000515947 110 ntBASIC3.47□□□□□ -1.85
VIMP08670 RNU5A-4P-201ENST00000516588 111 ntBASIC3.47□□□□□ -1.85
VIMP08670 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
VIMP08670 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 MTND1P24-201ENST00000552175 861 ntBASIC3.47□□□□□ -1.85
VIMP08670 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 AC087465.1-201ENST00000560574 245 ntBASIC3.47□□□□□ -1.85
VIMP08670 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.47□□□□□ -1.85
VIMP08670 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 AP001029.3-201ENST00000588063 596 ntBASIC3.47□□□□□ -1.85
VIMP08670 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.47□□□□□ -1.85
VIMP08670 TUG1_1.1-201ENST00000610654 145 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms