Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AP001521.1-201ENST00000609150 300 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 AL138960.2-201ENST00000625145 535 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 MIR622-201ENST00000638396 96 ntBASIC2.65□□□□□ -1.99
HLA-DPB1P04440 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DPB1P04440 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 ANKRD36P1-201ENST00000344424 659 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 MTCO1P56-201ENST00000401674 224 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL355143.1-201ENST00000407101 841 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RPL23AP47-201ENST00000408017 460 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RNU6-712P-201ENST00000410558 100 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 MTCO1P3-201ENST00000429327 192 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC012497.1-201ENST00000429392 575 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 SEPT7P5-201ENST00000434048 306 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC016696.1-201ENST00000446949 318 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RPL7P52-201ENST00000449200 742 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL445669.2-201ENST00000454425 421 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RPS20P24-201ENST00000457473 361 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 CAB39P1-201ENST00000502277 460 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 BOLA3P3-201ENST00000505182 232 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RNU6-27P-201ENST00000516146 107 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 OR4P1P-201ENST00000530808 1136 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC008127.2-201ENST00000549925 1075 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL121603.1-201ENST00000553815 142 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 MTCYBP27-201ENST00000555160 670 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC138915.2-201ENST00000569776 97 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 DNAJC19P3-201ENST00000594491 331 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL606834.3-201ENST00000602615 496 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 DPRXP5-201ENST00000604662 539 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC128687.1-201ENST00000605304 619 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC090425.2-201ENST00000608818 501 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC090115.4-201ENST00000609970 188 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AC021755.1-201ENST00000559747 1447 ntBASIC2.64□□□□□ -1.99
HLA-DPB1P04440 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DPB1P04440 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 MTCO1P23-201ENST00000415223 1526 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC073325.2-201ENST00000339545 159 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RNU1-35P-201ENST00000362782 153 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 SNORA7.4-201ENST00000384249 137 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 Y_RNA.578-201ENST00000390903 88 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RNU6-1000P-201ENST00000391066 106 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 MTND4P3-201ENST00000417829 541 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 DPRXP1-201ENST00000426312 460 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RPL36AP33-201ENST00000450395 310 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 HMGB1P15-201ENST00000453854 435 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC092754.2-201ENST00000463506 460 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC104982.1-201ENST00000478775 574 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RPS4XP13-201ENST00000483219 789 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC006445.1-201ENST00000491925 405 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 OR4G11P-201ENST00000492842 939 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC027309.2-201ENST00000520566 192 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 MIR5004-201ENST00000579078 107 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AL022067.1-201ENST00000602426 454 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 YPEL5P2-201ENST00000605553 359 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC009237.15-201ENST00000610252 501 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RNU6-1192P-201ENST00000612197 107 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 RNU6-489P-201ENST00000618289 107 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AL158163.2-201ENST00000619110 700 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC007318.2-201ENST00000620999 243 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 PLCE1P1-201ENST00000622094 305 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AC091925.2-201ENST00000625059 256 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms