Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MIR4672-201ENST00000583126 81 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC103881.1-201ENST00000603476 538 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL583856.2-201ENST00000606298 543 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AL590282.1-201ENST00000610379 1136 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL390240.1-201ENST00000612950 384 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC009318.4-201ENST00000620496 486 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL049777.1-201ENST00000622740 518 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC006963.1-201ENST00000624003 1052 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 CR381572.1-201ENST00000625098 102 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC087821.2-201ENST00000637086 450 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 MTND2P41-201ENST00000637599 773 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 AC000403.1-201ENST00000613696 3585 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA1P02708 OR5J1P-201ENST00000313544 939 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 SNORD82-201ENST00000365530 70 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 RNU6-1176P-201ENST00000390955 107 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 UBE2V1P2-201ENST00000397758 440 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AL583834.1-201ENST00000406943 343 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC092634.2-201ENST00000428146 1010 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA1P02708 RPL17P49-201ENST00000443728 411 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 MTCO1P48-201ENST00000448024 1096 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 MRPL42P4-201ENST00000453267 443 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA1P02708 RPS20P24-201ENST00000457473 361 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 AC010285.1-201ENST00000470580 392 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA1P02708 AC004924.1-201ENST00000480160 781 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 VPS26AP1-201ENST00000483197 979 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC068724.1-201ENST00000487100 792 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA1P02708 AC084024.2-201ENST00000503480 791 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC093767.1-201ENST00000504523 156 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC069306.1-201ENST00000507006 843 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA1P02708 RNU1-61P-201ENST00000516107 151 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 SULT1C2P1-202ENST00000562418 459 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA1P02708 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRNA1P02708 BNIP3P27-201ENST00000599991 412 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC006023.1-201ENST00000603944 259 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC128687.1-201ENST00000605304 619 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC103798.2-201ENST00000624292 632 ntBASIC3.36□□□□□ -1.87
CHRNA1P02708 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRNA1P02708 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRNA1P02708 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRNA1P02708 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA1P02708 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
CHRNA1P02708 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA1P02708 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA1P02708 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHRNA1P02708 RNU6-492P-201ENST00000363035 104 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.35□□□□□ -1.87
CHRNA1P02708 RNU6-730P-201ENST00000383954 104 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC110754.1-201ENST00000399740 601 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 SKINT1L-201ENST00000401057 817 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AL024474.1-201ENST00000404655 591 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 TOMM22P1-201ENST00000418578 312 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC027644.1-201ENST00000419595 298 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 FNDC3CP-201ENST00000420795 1155 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 DPRXP1-201ENST00000426312 460 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.35□□□□□ -1.87
CHRNA1P02708 TXNP6-201ENST00000510190 310 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA1P02708 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CHRNA1P02708 AC008127.2-201ENST00000549925 1075 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 TRAV37-201ENST00000553906 342 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 SNORD84-203ENST00000584275 78 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC092954.1-201ENST00000609121 445 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC006329.2-201ENST00000611491 394 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AL590240.3-201ENST00000621416 943 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA1P02708 AC007998.5-201ENST00000622938 237 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 AC010872.1-201ENST00000624225 675 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 ZNF663P-202ENST00000641770 1131 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA1P02708 AL035425.3-201ENST00000564206 4996 ntBASIC3.35□□□□□ -1.87
CHRNA1P02708 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHRNA1P02708 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
CHRNA1P02708 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CHRNA1P02708 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.34□□□□□ -1.87
CHRNA1P02708 RNA5SP258-201ENST00000362750 119 ntBASIC3.34□□□□□ -1.87
CHRNA1P02708 RNU6-1249P-201ENST00000363237 111 ntBASIC3.34□□□□□ -1.87
CHRNA1P02708 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms