Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
PDGFBP01127 SUMO2P20-201ENST00000520803 283 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.46□□□□□ -1.86
PDGFBP01127 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFBP01127 AL391156.1-201ENST00000554965 554 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.46□□□□□ -1.86
PDGFBP01127 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 AL360157.1-201ENST00000565962 87 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC141257.3-201ENST00000572906 215 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFBP01127 AC006539.2-201ENST00000601729 572 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 RPP40P2-201ENST00000603596 712 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC104763.2-201ENST00000604179 382 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AL450336.1-201ENST00000605180 586 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC012603.1-201ENST00000606424 528 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC034229.4-201ENST00000607861 441 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFBP01127 AL355816.2-201ENST00000610049 647 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AL355810.1-201ENST00000614629 552 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC009464.1-201ENST00000615731 469 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC013470.4-201ENST00000619978 986 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 LINC02211-204ENST00000642024 1070 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.86
PDGFBP01127 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFBP01127 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFBP01127 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC016769.3-201ENST00000396562 315 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AL591034.1-201ENST00000407447 340 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 MTATP6P20-201ENST00000414147 562 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 MTND4LP10-201ENST00000435146 291 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AL589880.1-201ENST00000448271 287 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AL445669.2-201ENST00000454425 421 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC099563.1-201ENST00000456086 418 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 USP9YP25-201ENST00000457708 443 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFBP01127 RPS23P3-201ENST00000470993 430 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC012181.1-201ENST00000479895 423 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFBP01127 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 BNIP3P24-201ENST00000593398 557 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 AC026790.2-201ENST00000606282 430 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 AL450472.3-201ENST00000615578 367 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFBP01127 AC095031.1-201ENST00000623685 672 ntBASIC3.45□□□□□ -1.86
PDGFBP01127 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFBP01127 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PDGFBP01127 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PDGFBP01127 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFBP01127 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFBP01127 AC099786.3-201ENST00000565735 1410 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFBP01127 AL356274.2-201ENST00000624379 3752 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDGFBP01127 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFBP01127 SNORA40.2-201ENST00000390847 128 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 RNU2-15P-201ENST00000410692 191 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 RPL23AP74-201ENST00000437246 471 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 MTCYBP31-201ENST00000438855 1122 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 MTCYBP34-201ENST00000439552 670 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
PDGFBP01127 RPL23AP31-201ENST00000456160 467 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFBP01127 RN7SL432P-201ENST00000484057 298 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms