Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL137843.1-201ENST00000605078 385 ntBASIC1.76□□□□□ -2.13
SIX6O95475 AC245884.12-201ENST00000615364 59 ntBASIC1.76□□□□□ -2.13
SIX6O95475 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.76□□□□□ -2.13
SIX6O95475 MIR6810-201ENST00000622701 70 ntBASIC1.76□□□□□ -2.13
SIX6O95475 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.76□□□□□ -2.13
SIX6O95475 AC093591.3-201ENST00000634516 308 ntBASIC1.76□□□□□ -2.13
SIX6O95475 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
SIX6O95475 AL359715.4-201ENST00000606629 1436 ntBASIC1.75□□□□□ -2.13
SIX6O95475 RNU6-244P-201ENST00000391028 104 ntBASIC1.75□□□□□ -2.13
SIX6O95475 SNORD65-201ENST00000391079 73 ntBASIC1.75□□□□□ -2.13
SIX6O95475 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
SIX6O95475 Y_RNA.625-201ENST00000411256 107 ntBASIC1.75□□□□□ -2.13
SIX6O95475 RPS3AP25-201ENST00000411660 793 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AJ239321.1-201ENST00000424255 564 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX6O95475 UBE2V1P6-201ENST00000430840 422 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.75□□□□□ -2.13
SIX6O95475 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX6O95475 CDC27P1-201ENST00000445384 715 ntBASIC1.75□□□□□ -2.13
SIX6O95475 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 RPL31P20-201ENST00000449593 360 ntBASIC1.75□□□□□ -2.13
SIX6O95475 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 MTCYBP14-201ENST00000457471 715 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AC010285.1-201ENST00000470580 392 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.75□□□□□ -2.13
SIX6O95475 NDUFS5P6-201ENST00000529136 295 ntBASIC1.75□□□□□ -2.13
SIX6O95475 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 CR383656.14-201ENST00000551951 406 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AC012182.1-201ENST00000570133 895 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX6O95475 COX6CP3-201ENST00000580869 223 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX6O95475 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
SIX6O95475 NUTF2P8-201ENST00000604593 363 ntBASIC1.75□□□□□ -2.13
SIX6O95475 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 MIR8057-201ENST00000620957 69 ntBASIC1.75□□□□□ -2.13
SIX6O95475 AL031601.2-202ENST00000622650 282 ntBASIC1.75□□□□□ -2.13
SIX6O95475 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
SIX6O95475 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SIX6O95475 ZNF37BP-203ENST00000452306 1352 ntBASIC1.74□□□□□ -2.13
SIX6O95475 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SIX6O95475 Y_RNA.62-201ENST00000362840 99 ntBASIC1.74□□□□□ -2.13
SIX6O95475 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.74□□□□□ -2.13
SIX6O95475 MIR134-201ENST00000385258 73 ntBASIC1.74□□□□□ -2.13
SIX6O95475 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SIX6O95475 AL606495.1-201ENST00000422100 813 ntBASIC1.74□□□□□ -2.13
SIX6O95475 UBE2D3P2-201ENST00000424409 445 ntBASIC1.74□□□□□ -2.13
SIX6O95475 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.74□□□□□ -2.13
SIX6O95475 AC092427.1-202ENST00000430569 476 ntBASIC1.74□□□□□ -2.13
SIX6O95475 ARL4AP4-201ENST00000434170 518 ntBASIC1.74□□□□□ -2.13
SIX6O95475 NANOGNBP1-201ENST00000448444 480 ntBASIC1.74□□□□□ -2.13
SIX6O95475 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.74□□□□□ -2.13
SIX6O95475 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.74□□□□□ -2.13
SIX6O95475 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.74□□□□□ -2.13
SIX6O95475 SYPL1P1-201ENST00000473622 768 ntBASIC1.74□□□□□ -2.13
SIX6O95475 RPL23AP41-201ENST00000484754 458 ntBASIC1.74□□□□□ -2.13
SIX6O95475 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.74□□□□□ -2.13
SIX6O95475 AC096571.1-202ENST00000506634 735 ntBASIC1.74□□□□□ -2.13
SIX6O95475 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.74□□□□□ -2.13
SIX6O95475 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.74□□□□□ -2.13
SIX6O95475 SNORA67.7-201ENST00000516664 135 ntBASIC1.74□□□□□ -2.13
SIX6O95475 HIGD1AP18-201ENST00000520730 278 ntBASIC1.74□□□□□ -2.13
SIX6O95475 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.74□□□□□ -2.13
SIX6O95475 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.74□□□□□ -2.13
SIX6O95475 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.74□□□□□ -2.13
SIX6O95475 AC008739.3-201ENST00000603262 127 ntBASIC1.74□□□□□ -2.13
SIX6O95475 ATP1B3P1-201ENST00000605365 821 ntBASIC1.74□□□□□ -2.13
SIX6O95475 SNORA35B-201ENST00000607417 129 ntBASIC1.74□□□□□ -2.13
SIX6O95475 AC093732.2-201ENST00000607950 274 ntBASIC1.74□□□□□ -2.13
SIX6O95475 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.74□□□□□ -2.13
SIX6O95475 AC084757.4-201ENST00000616350 526 ntBASIC1.74□□□□□ -2.13
SIX6O95475 DUXAP9-208ENST00000622815 614 ntBASIC1.74□□□□□ -2.13
SIX6O95475 AC020923.1-201ENST00000624021 917 ntBASIC1.74□□□□□ -2.13
SIX6O95475 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.74□□□□□ -2.13
SIX6O95475 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.73□□□□□ -2.13
SIX6O95475 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.73□□□□□ -2.13
SIX6O95475 MIR34B-201ENST00000385076 84 ntBASIC1.73□□□□□ -2.13
SIX6O95475 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SIX6O95475 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.73□□□□□ -2.13
SIX6O95475 RNU4-72P-201ENST00000410754 173 ntBASIC1.73□□□□□ -2.13
SIX6O95475 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.73□□□□□ -2.13
SIX6O95475 AC016769.2-201ENST00000414815 475 ntBASIC1.73□□□□□ -2.13
SIX6O95475 AL137014.1-201ENST00000420490 1226 ntBASIC1.73□□□□□ -2.13
SIX6O95475 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.73□□□□□ -2.13
SIX6O95475 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SIX6O95475 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.73□□□□□ -2.13
SIX6O95475 AL031183.1-201ENST00000457667 207 ntBASIC1.73□□□□□ -2.13
SIX6O95475 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SIX6O95475 AC090453.1-201ENST00000495560 436 ntBASIC1.73□□□□□ -2.13
SIX6O95475 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SIX6O95475 KLRA1P-201ENST00000503499 986 ntBASIC1.73□□□□□ -2.13
SIX6O95475 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.73□□□□□ -2.13
SIX6O95475 AC111000.5-201ENST00000506559 1178 ntBASIC1.73□□□□□ -2.13
SIX6O95475 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.73□□□□□ -2.13
SIX6O95475 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.73□□□□□ -2.13
SIX6O95475 ERHP1-201ENST00000523006 310 ntBASIC1.73□□□□□ -2.13
SIX6O95475 SERPINE4P-201ENST00000554978 281 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms