Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX3O95343 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX3O95343 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX3O95343 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 AL513185.3-201ENST00000433335 1300 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX3O95343 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 FRG1BP-201ENST00000278882 761 ntBASIC3.51□□□□□ -1.85
SIX3O95343 OR5H2-201ENST00000355273 945 ntBASIC3.51□□□□□ -1.85
SIX3O95343 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIX3O95343 RNU6-97P-201ENST00000363387 104 ntBASIC3.51□□□□□ -1.85
SIX3O95343 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIX3O95343 RNU2-43P-201ENST00000410306 190 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX3O95343 AC007390.1-201ENST00000415722 356 ntBASIC3.51□□□□□ -1.85
SIX3O95343 ELOCP9-201ENST00000418624 239 ntBASIC3.51□□□□□ -1.85
SIX3O95343 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX3O95343 ZYG11AP1-201ENST00000430329 837 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX3O95343 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX3O95343 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX3O95343 AC007967.1-201ENST00000455422 1159 ntBASIC3.51□□□□□ -1.85
SIX3O95343 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.51□□□□□ -1.85
SIX3O95343 AC104563.1-201ENST00000476147 376 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX3O95343 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX3O95343 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.51□□□□□ -1.85
SIX3O95343 CBX3P3-201ENST00000508108 532 ntBASIC3.51□□□□□ -1.85
SIX3O95343 ARL2BPP6-201ENST00000512757 439 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.51□□□□□ -1.85
SIX3O95343 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX3O95343 AC239860.2-201ENST00000525886 270 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.51□□□□□ -1.85
SIX3O95343 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX3O95343 AGGF1P5-201ENST00000567900 919 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.51□□□□□ -1.85
SIX3O95343 MIR5195-201ENST00000583555 115 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC104984.5-201ENST00000586878 94 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC013444.2-201ENST00000603317 787 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC012443.1-201ENST00000605605 231 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AL442067.2-201ENST00000614033 363 ntBASIC3.51□□□□□ -1.85
SIX3O95343 MIR8058-201ENST00000615737 89 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AL391261.4-201ENST00000616012 481 ntBASIC3.51□□□□□ -1.85
SIX3O95343 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX3O95343 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.51□□□□□ -1.85
SIX3O95343 AC006927.4-201ENST00000639187 543 ntBASIC3.51□□□□□ -1.85
SIX3O95343 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
SIX3O95343 ZNF876P-202ENST00000398732 1485 ntBASIC3.51□□□□□ -1.85
SIX3O95343 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 TNPO1P3-201ENST00000436471 2662 ntBASIC3.51□□□□□ -1.85
SIX3O95343 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIX3O95343 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX3O95343 AC068647.1-201ENST00000489539 2265 ntBASIC3.5□□□□□ -1.85
SIX3O95343 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX3O95343 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX3O95343 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX3O95343 FAM133CP-201ENST00000332869 704 ntBASIC3.5□□□□□ -1.85
SIX3O95343 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX3O95343 MIR513B-201ENST00000385136 84 ntBASIC3.5□□□□□ -1.85
SIX3O95343 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 MTCYBP38-201ENST00000417160 1123 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC083875.1-201ENST00000419509 405 ntBASIC3.5□□□□□ -1.85
SIX3O95343 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 AL592447.1-201ENST00000447592 540 ntBASIC3.5□□□□□ -1.85
SIX3O95343 SSXP4-201ENST00000451349 245 ntBASIC3.5□□□□□ -1.85
SIX3O95343 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
SIX3O95343 RN7SL429P-201ENST00000479090 223 ntBASIC3.5□□□□□ -1.85
SIX3O95343 RN7SL489P-201ENST00000486185 223 ntBASIC3.5□□□□□ -1.85
SIX3O95343 RN7SL327P-201ENST00000488659 223 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC020699.1-201ENST00000505161 445 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
SIX3O95343 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX3O95343 MTND2P32-201ENST00000521584 1038 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.5□□□□□ -1.85
SIX3O95343 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 MED28P6-201ENST00000558776 231 ntBASIC3.5□□□□□ -1.85
SIX3O95343 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX3O95343 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 MIR5685-201ENST00000579080 79 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.5□□□□□ -1.85
SIX3O95343 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX3O95343 AC105148.1-201ENST00000604961 409 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC092354.2-201ENST00000607786 514 ntBASIC3.5□□□□□ -1.85
SIX3O95343 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX3O95343 RN7SL853P-201ENST00000617250 223 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms