Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.46□□□□□ -1.86
PCF11O94913 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.46□□□□□ -1.86
PCF11O94913 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCF11O94913 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCF11O94913 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCF11O94913 Y_RNA.112-201ENST00000363250 102 ntBASIC3.46□□□□□ -1.86
PCF11O94913 Y_RNA.224-201ENST00000364308 111 ntBASIC3.46□□□□□ -1.86
PCF11O94913 RNU1-51P-201ENST00000365345 176 ntBASIC3.46□□□□□ -1.86
PCF11O94913 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.46□□□□□ -1.86
PCF11O94913 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.46□□□□□ -1.86
PCF11O94913 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.46□□□□□ -1.86
PCF11O94913 ARF4P2-201ENST00000430209 526 ntBASIC3.46□□□□□ -1.86
PCF11O94913 CR769767.1-201ENST00000436337 346 ntBASIC3.46□□□□□ -1.86
PCF11O94913 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.46□□□□□ -1.86
PCF11O94913 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.46□□□□□ -1.86
PCF11O94913 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.46□□□□□ -1.86
PCF11O94913 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.46□□□□□ -1.86
PCF11O94913 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.46□□□□□ -1.86
PCF11O94913 AK6P1-201ENST00000540219 478 ntBASIC3.46□□□□□ -1.86
PCF11O94913 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.46□□□□□ -1.86
PCF11O94913 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCF11O94913 AC091046.2-201ENST00000620775 665 ntBASIC3.46□□□□□ -1.86
PCF11O94913 CYP3A51P-201ENST00000633513 256 ntBASIC3.46□□□□□ -1.86
PCF11O94913 AC093591.3-201ENST00000634516 308 ntBASIC3.46□□□□□ -1.86
PCF11O94913 AC027514.1-201ENST00000588561 1603 ntBASIC3.46□□□□□ -1.86
PCF11O94913 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
PCF11O94913 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.45□□□□□ -1.86
PCF11O94913 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.45□□□□□ -1.86
PCF11O94913 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.45□□□□□ -1.86
PCF11O94913 RNU1-138P-201ENST00000384093 164 ntBASIC3.45□□□□□ -1.86
PCF11O94913 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.45□□□□□ -1.86
PCF11O94913 AIMP1P1-201ENST00000418670 937 ntBASIC3.45□□□□□ -1.86
PCF11O94913 RPL30P3-201ENST00000424262 333 ntBASIC3.45□□□□□ -1.86
PCF11O94913 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.45□□□□□ -1.86
PCF11O94913 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.45□□□□□ -1.86
PCF11O94913 HMGB3P30-201ENST00000457863 606 ntBASIC3.45□□□□□ -1.86
PCF11O94913 RPL23AP62-201ENST00000463396 453 ntBASIC3.45□□□□□ -1.86
PCF11O94913 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 AC025260.1-201ENST00000548858 430 ntBASIC3.45□□□□□ -1.86
PCF11O94913 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.45□□□□□ -1.86
PCF11O94913 AC103710.1-201ENST00000610003 901 ntBASIC3.45□□□□□ -1.86
PCF11O94913 AL133370.2-201ENST00000619934 439 ntBASIC3.45□□□□□ -1.86
PCF11O94913 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.45□□□□□ -1.86
PCF11O94913 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCF11O94913 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.44□□□□□ -1.86
PCF11O94913 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCF11O94913 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.44□□□□□ -1.86
PCF11O94913 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.44□□□□□ -1.86
PCF11O94913 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.44□□□□□ -1.86
PCF11O94913 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
PCF11O94913 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.44□□□□□ -1.86
PCF11O94913 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCF11O94913 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCF11O94913 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.43□□□□□ -1.86
PCF11O94913 RN7SKP123-201ENST00000410732 291 ntBASIC3.43□□□□□ -1.86
PCF11O94913 MTCYBP7-201ENST00000419540 1134 ntBASIC3.43□□□□□ -1.86
PCF11O94913 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.43□□□□□ -1.86
PCF11O94913 TRBV26-201ENST00000456572 344 ntBASIC3.43□□□□□ -1.86
PCF11O94913 AC072039.1-201ENST00000477611 581 ntBASIC3.43□□□□□ -1.86
PCF11O94913 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.43□□□□□ -1.86
PCF11O94913 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.43□□□□□ -1.86
PCF11O94913 RNA5SP200-201ENST00000516360 103 ntBASIC3.43□□□□□ -1.86
PCF11O94913 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.43□□□□□ -1.86
PCF11O94913 AC090897.3-201ENST00000636973 1157 ntBASIC3.43□□□□□ -1.86
PCF11O94913 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCF11O94913 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCF11O94913 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCF11O94913 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.42□□□□□ -1.86
PCF11O94913 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.42□□□□□ -1.86
PCF11O94913 AL049830.2-201ENST00000480072 201 ntBASIC3.42□□□□□ -1.86
PCF11O94913 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.42□□□□□ -1.86
PCF11O94913 MIR449C-201ENST00000516047 92 ntBASIC3.42□□□□□ -1.86
PCF11O94913 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.42□□□□□ -1.86
PCF11O94913 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCF11O94913 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCF11O94913 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCF11O94913 RNA5SP167-201ENST00000365461 116 ntBASIC3.42□□□□□ -1.86
PCF11O94913 USP9YP6-201ENST00000413550 854 ntBASIC3.42□□□□□ -1.86
PCF11O94913 AC004866.2-201ENST00000438285 481 ntBASIC3.42□□□□□ -1.86
PCF11O94913 USP9YP34-201ENST00000453983 808 ntBASIC3.42□□□□□ -1.86
PCF11O94913 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.42□□□□□ -1.86
PCF11O94913 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCF11O94913 AC106730.3-201ENST00000624568 641 ntBASIC3.42□□□□□ -1.86
PCF11O94913 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.42□□□□□ -1.86
PCF11O94913 AC092326.2-201ENST00000624772 1561 ntBASIC3.41□□□□□ -1.86
PCF11O94913 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCF11O94913 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCF11O94913 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.41□□□□□ -1.86
PCF11O94913 SNORD108-201ENST00000459332 71 ntBASIC3.41□□□□□ -1.86
PCF11O94913 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.41□□□□□ -1.86
PCF11O94913 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.41□□□□□ -1.86
PCF11O94913 AC016252.1-201ENST00000609721 474 ntBASIC3.41□□□□□ -1.86
PCF11O94913 MIR6779-201ENST00000617283 64 ntBASIC3.41□□□□□ -1.86
PCF11O94913 VN1R7P-201ENST00000619242 903 ntBASIC3.41□□□□□ -1.86
PCF11O94913 AL356266.1-201ENST00000623311 483 ntBASIC3.41□□□□□ -1.86
PCF11O94913 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms