Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP4O75379 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 RPS4XP5-202ENST00000449995 1334 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP4O75379 Z95327.2-201ENST00000414579 1873 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VAMP4O75379 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.39□□□□□ -1.55
VAMP4O75379 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 FRG1BP-201ENST00000278882 761 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 Y_RNA.159-201ENST00000363674 87 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 SNORA37-201ENST00000384504 129 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.38□□□□□ -1.55
VAMP4O75379 RPS23P10-201ENST00000416185 486 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC091390.1-201ENST00000433904 331 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AL356276.2-201ENST00000435919 558 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 HSPE1P28-201ENST00000443139 211 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 SNRPGP6-201ENST00000451124 220 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 RAD23BP3-201ENST00000454157 1152 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AF213884.1-201ENST00000488102 463 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AC079382.1-201ENST00000493346 557 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 CENPUP1-201ENST00000526649 1202 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC123904.3-201ENST00000547218 814 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP4O75379 AC093788.1-201ENST00000609356 927 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP4O75379 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP4O75379 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP4O75379 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP4O75379 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP4O75379 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP4O75379 KPNA2P2-201ENST00000419546 1489 ntBASIC5.38□□□□□ -1.55
VAMP4O75379 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP4O75379 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP4O75379 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 AC074029.4-201ENST00000624796 1859 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VAMP4O75379 RNU6-878P-201ENST00000384578 110 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 RNA5SP118-201ENST00000410385 109 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AL353193.1-201ENST00000421444 268 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC009965.2-201ENST00000425328 970 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AL513185.2-201ENST00000425543 193 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.37□□□□□ -1.55
VAMP4O75379 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP4O75379 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VAMP4O75379 AC005726.1-201ENST00000494679 427 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 MRPL49P2-201ENST00000521066 465 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP4O75379 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP4O75379 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP4O75379 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP4O75379 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 HNRNPCP4-201ENST00000571636 900 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC022655.2-201ENST00000577280 318 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AC007621.1-201ENST00000604544 437 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AL035413.2-201ENST00000604801 525 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 MIR432-201ENST00000606207 94 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 OR10AB1P-201ENST00000609613 938 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VAMP4O75379 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 AC139713.2-215ENST00000641428 5037 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VAMP4O75379 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 AC092447.10-201ENST00000620607 1652 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 AL118496.1-201ENST00000440201 1812 ntBASIC5.37□□□□□ -1.55
VAMP4O75379 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP4O75379 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP4O75379 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.36□□□□□ -1.55
VAMP4O75379 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.36□□□□□ -1.55
VAMP4O75379 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VAMP4O75379 SNORA70.2-201ENST00000364506 135 ntBASIC5.36□□□□□ -1.55
VAMP4O75379 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP4O75379 RNU1-39P-201ENST00000383897 165 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms