Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RPEP3-201ENST00000425462 676 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 MTCO2P19-201ENST00000427513 598 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC133104.1-201ENST00000429100 218 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 NEK4P1-201ENST00000433383 879 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC104850.1-201ENST00000435940 476 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AL512326.1-201ENST00000443050 721 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 MTND2P24-201ENST00000453434 806 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 SNORD121B-201ENST00000458838 81 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC021382.1-201ENST00000483523 359 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 RPL23AP41-201ENST00000484754 458 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 NPM1P41-201ENST00000512920 831 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC010342.1-201ENST00000514047 877 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 RNA5SP497-201ENST00000516081 97 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS4BO75351 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC024224.1-201ENST00000538284 609 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AK6P1-201ENST00000540219 478 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AL845331.3-202ENST00000562856 261 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AL356432.3-201ENST00000568952 465 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC068135.2-201ENST00000569293 1028 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AL391646.1-201ENST00000603860 190 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC004853.1-201ENST00000604902 698 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 ARF4P1-201ENST00000605447 541 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AL391813.2-201ENST00000609113 322 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AL590282.1-201ENST00000610379 1136 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 AC009268.2-201ENST00000621925 457 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 AC091905.1-201ENST00000624400 311 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
VPS4BO75351 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS4BO75351 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 PABPC1P7-201ENST00000413177 1513 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VPS4BO75351 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VPS4BO75351 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VPS4BO75351 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS4BO75351 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS4BO75351 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 Z73965.1-201ENST00000623412 2297 ntBASIC4.34□□□□□ -1.72
VPS4BO75351 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
VPS4BO75351 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS4BO75351 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
VPS4BO75351 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
VPS4BO75351 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 EIF2AP4-201ENST00000424793 1781 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS4BO75351 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC024560.2-201ENST00000507981 1497 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RNU6-867P-201ENST00000364956 107 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RNU6-339P-201ENST00000384310 107 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 Y_RNA.548-201ENST00000384656 105 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 U3.20-201ENST00000390909 217 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 FGF7P8-201ENST00000402994 292 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RNU2-15P-201ENST00000410692 191 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS4BO75351 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC233728.2-201ENST00000425348 757 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RPL31P35-201ENST00000431058 377 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS4BO75351 VN1R34P-201ENST00000447387 883 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC114755.5-201ENST00000447760 831 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AL136380.1-201ENST00000447970 162 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RPL23AP24-201ENST00000458203 385 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC055855.1-201ENST00000489563 579 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 FCF1P3-201ENST00000496394 590 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC010493.1-201ENST00000513479 292 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 Vault.3-201ENST00000516676 95 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS4BO75351 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms