Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PTCD1O75127 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 RNVU1-3-201ENST00000364313 161 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RNU6-831P-201ENST00000384548 107 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 MIR558-201ENST00000384920 94 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 AL606923.1-201ENST00000406616 190 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RNU4-61P-201ENST00000411243 107 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 HMGN1P24-201ENST00000412282 298 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL591848.1-201ENST00000413092 322 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCD1O75127 HSPE1P1-201ENST00000421494 318 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 CBX3P6-201ENST00000430257 527 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCD1O75127 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC079168.2-201ENST00000453977 416 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RNU7-182P-201ENST00000459009 62 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC011276.1-201ENST00000469688 323 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC010618.1-201ENST00000469924 477 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC022034.3-201ENST00000471393 478 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RN7SL283P-201ENST00000489055 303 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL139099.1-201ENST00000497398 403 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PTCD1O75127 RN7SKP21-201ENST00000516503 220 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 RNU6-709P-201ENST00000517257 104 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.12□□□□□ -1.43
PTCD1O75127 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC018630.1-201ENST00000541376 925 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC105129.1-201ENST00000560250 297 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.12□□□□□ -1.43
PTCD1O75127 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCD1O75127 AC103710.2-201ENST00000609912 942 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCD1O75127 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 AC011944.2-201ENST00000624440 683 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AC068724.3-201ENST00000625906 87 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 AL133216.2-202ENST00000634512 349 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PTCD1O75127 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 AC109446.4-201ENST00000623235 2755 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCD1O75127 AL442128.2-201ENST00000620246 1824 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCD1O75127 AC002525.1-201ENST00000624392 1622 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCD1O75127 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PTCD1O75127 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCD1O75127 Y_RNA.100-201ENST00000363141 102 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 Y_RNA.126-201ENST00000363382 111 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 Y_RNA.315-201ENST00000365117 102 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PTCD1O75127 MIR514A2-201ENST00000385131 88 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 MIR514A3-201ENST00000385132 88 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RNU11-201ENST00000387069 134 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 MIR1193-201ENST00000408109 78 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RNU2-21P-201ENST00000410368 188 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCD1O75127 MTATP6P16-201ENST00000434543 526 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RPL21P89-201ENST00000444021 467 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCD1O75127 RNA5SP464-201ENST00000516251 108 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RN7SKP219-201ENST00000516825 296 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RNU6-798P-201ENST00000516912 103 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCD1O75127 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCD1O75127 RPL7P20-201ENST00000520308 745 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCD1O75127 AC011477.5-201ENST00000586571 259 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCD1O75127 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCD1O75127 AL020997.2-201ENST00000602607 184 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AL360012.1-201ENST00000602813 131 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCD1O75127 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTCD1O75127 ADAM24P-201ENST00000398655 2101 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 RAD17P1-201ENST00000418130 2042 ntBASIC6.11□□□□□ -1.43
PTCD1O75127 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCD1O75127 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCD1O75127 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCD1O75127 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
PTCD1O75127 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD1O75127 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD1O75127 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCD1O75127 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms