Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RPL7AP73-201ENST00000413490 353 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.98□□□□□ -1.77
SMAD6O43541 OFD1P18Y-201ENST00000420889 959 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.98□□□□□ -1.77
SMAD6O43541 AL512649.1-201ENST00000428997 581 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 RPS7P5-201ENST00000441482 581 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 MTATP6P30-201ENST00000443540 664 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC244505.5-201ENST00000443639 207 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC112653.1-201ENST00000443851 386 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.98□□□□□ -1.77
SMAD6O43541 RANP8-201ENST00000444720 713 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 HMGN2P7-201ENST00000456186 273 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC010307.1-201ENST00000467206 836 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC146507.1-201ENST00000468335 354 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 RN7SL132P-201ENST00000478131 296 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC108078.3-201ENST00000502633 489 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC048346.1-201ENST00000510247 144 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.98□□□□□ -1.77
SMAD6O43541 RNU6-885P-201ENST00000516607 104 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 RNA5SP135-201ENST00000517019 125 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 AP001189.2-201ENST00000527320 189 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AP002748.2-201ENST00000528671 348 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AP004242.1-201ENST00000533701 349 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.98□□□□□ -1.77
SMAD6O43541 CENPUP2-201ENST00000555897 1186 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC006960.3-201ENST00000561845 705 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 EIF5A2P1-201ENST00000564027 460 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC009101.1-201ENST00000568135 242 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC138915.2-201ENST00000569776 97 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AP001004.1-201ENST00000582468 324 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.98□□□□□ -1.77
SMAD6O43541 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC112230.1-201ENST00000604342 547 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC008945.2-201ENST00000606056 604 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.98□□□□□ -1.77
SMAD6O43541 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC006338.1-201ENST00000618453 749 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC138649.3-201ENST00000622154 254 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 DUXAP9-208ENST00000622815 614 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 AC079228.1-201ENST00000624774 1049 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 MIR3688-2-201ENST00000636963 87 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 MKKS-204ENST00000639674 192 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.98□□□□□ -1.77
SMAD6O43541 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.98□□□□□ -1.77
SMAD6O43541 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 MTND4P16-201ENST00000466108 1367 ntBASIC3.98□□□□□ -1.77
SMAD6O43541 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SMAD6O43541 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
SMAD6O43541 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMAD6O43541 AC107982.1-201ENST00000507171 1300 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.97□□□□□ -1.77
SMAD6O43541 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMAD6O43541 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMAD6O43541 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SMAD6O43541 Y_RNA.11-201ENST00000362375 109 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 RNU6-1066P-201ENST00000363573 105 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 Y_RNA.813-201ENST00000364639 102 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.97□□□□□ -1.77
SMAD6O43541 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMAD6O43541 SNORA70E-201ENST00000384492 135 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 CIR1P3-201ENST00000405137 479 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 HMGB3P23-201ENST00000414981 585 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AC234782.4-201ENST00000417646 1048 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.97□□□□□ -1.77
SMAD6O43541 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.97□□□□□ -1.77
SMAD6O43541 AL389915.1-201ENST00000422463 466 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AC233728.2-201ENST00000425348 757 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.97□□□□□ -1.77
SMAD6O43541 USP12PX-201ENST00000432383 1057 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.97□□□□□ -1.77
SMAD6O43541 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMAD6O43541 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.97□□□□□ -1.77
SMAD6O43541 PDSS1P2-201ENST00000449397 678 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AC092001.1-201ENST00000453012 261 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AMD1P1-201ENST00000457220 922 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 SNORD42A-201ENST00000459584 64 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 RPL37P6-202ENST00000464216 403 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
SMAD6O43541 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.97□□□□□ -1.77
SMAD6O43541 AL035404.1-201ENST00000497982 568 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.97□□□□□ -1.77
SMAD6O43541 PTGES3P3-201ENST00000511479 482 ntBASIC3.97□□□□□ -1.77
SMAD6O43541 RNU6-507P-201ENST00000516045 100 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms