Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNY3P13-201ENST00000365542 102 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 RNU6-629P-201ENST00000384061 103 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 SSXP9-201ENST00000417503 292 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC133104.1-201ENST00000429100 218 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 USP9YP9-201ENST00000429406 715 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.28□□□□□ -1.72
PHGDHO43175 MTATP6P13-201ENST00000438531 667 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 RPL21P89-201ENST00000444021 467 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC093392.2-201ENST00000450682 337 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.28□□□□□ -1.72
PHGDHO43175 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.28□□□□□ -1.72
PHGDHO43175 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 RNA5SP337-201ENST00000517007 109 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.28□□□□□ -1.72
PHGDHO43175 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.28□□□□□ -1.72
PHGDHO43175 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.28□□□□□ -1.72
PHGDHO43175 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AL845331.3-202ENST00000562856 261 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.28□□□□□ -1.72
PHGDHO43175 MTATP6P3-201ENST00000581686 676 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 SNORD84-203ENST00000584275 78 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC005255.1-201ENST00000593748 216 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 SNRPGP15-201ENST00000600149 222 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC126118.1-201ENST00000607744 628 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC100827.5-201ENST00000615883 426 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC006338.1-201ENST00000618453 749 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 AP005019.3-201ENST00000620418 560 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AL645937.1-201ENST00000641739 1652 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PHGDHO43175 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
PHGDHO43175 AC011266.1-201ENST00000624119 3569 ntBASIC4.28□□□□□ -1.72
PHGDHO43175 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.27□□□□□ -1.73
PHGDHO43175 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PHGDHO43175 OR5J1P-201ENST00000313544 939 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 MIR331-201ENST00000362302 94 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 RNY1P12-201ENST00000364251 105 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 RPL7P60-201ENST00000397636 735 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 MIR937-201ENST00000401271 86 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 RNU2-62P-201ENST00000410868 191 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 RAD23BP2-201ENST00000416003 1207 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AL161631.1-201ENST00000417933 486 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
PHGDHO43175 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.27□□□□□ -1.73
PHGDHO43175 MTND3P21-201ENST00000433774 331 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC093156.1-201ENST00000440382 670 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 HMGN2P21-201ENST00000447764 270 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC073264.2-201ENST00000448886 166 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 AC126182.1-201ENST00000478134 357 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC021146.1-201ENST00000511202 716 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
PHGDHO43175 DEFB108D-201ENST00000527787 222 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.27□□□□□ -1.73
PHGDHO43175 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
PHGDHO43175 AC008277.2-201ENST00000605196 797 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AP000860.1-201ENST00000605250 559 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC007684.1-201ENST00000609671 477 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AL590282.1-201ENST00000610379 1136 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AL161616.1-201ENST00000611867 286 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AL021997.2-201ENST00000615674 271 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AC019226.1-201ENST00000625666 515 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 MIR6863-201ENST00000636112 90 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
PHGDHO43175 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PHGDHO43175 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PHGDHO43175 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.26□□□□□ -1.73
PHGDHO43175 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
PHGDHO43175 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms