Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX4O14627 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX4O14627 OR6C73P-201ENST00000546432 358 ntBASIC3.13□□□□□ -1.91
CDX4O14627 SULT1C2P1-202ENST00000562418 459 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC061975.8-201ENST00000587058 721 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.13□□□□□ -1.91
CDX4O14627 YWHAQP7-201ENST00000603536 658 ntBASIC3.13□□□□□ -1.91
CDX4O14627 DUXAP3-201ENST00000603616 594 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AL139344.1-201ENST00000605228 195 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC110741.2-201ENST00000605278 268 ntBASIC3.13□□□□□ -1.91
CDX4O14627 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX4O14627 AC005332.6-201ENST00000613178 446 ntBASIC3.13□□□□□ -1.91
CDX4O14627 U73479.1-201ENST00000618062 168 ntBASIC3.13□□□□□ -1.91
CDX4O14627 AC091304.6-201ENST00000619761 202 ntBASIC3.13□□□□□ -1.91
CDX4O14627 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX4O14627 ZNF876P-202ENST00000398732 1485 ntBASIC3.13□□□□□ -1.91
CDX4O14627 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 AC006504.1-201ENST00000562493 3666 ntBASIC3.13□□□□□ -1.91
CDX4O14627 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX4O14627 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDX4O14627 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDX4O14627 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 AC027287.1-201ENST00000553115 1453 ntBASIC3.12□□□□□ -1.91
CDX4O14627 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDX4O14627 RNU4-40P-201ENST00000364351 143 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AL445529.1-201ENST00000398713 389 ntBASIC3.12□□□□□ -1.91
CDX4O14627 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AMD1P2-201ENST00000412936 992 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 AL356320.2-201ENST00000417263 507 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
CDX4O14627 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 AC084290.1-201ENST00000434995 374 ntBASIC3.12□□□□□ -1.91
CDX4O14627 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 MTCO2P25-201ENST00000447065 681 ntBASIC3.12□□□□□ -1.91
CDX4O14627 PTENP1-201ENST00000447117 1215 ntBASIC3.12□□□□□ -1.91
CDX4O14627 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDX4O14627 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 USP9YP25-201ENST00000457708 443 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
CDX4O14627 AC092451.1-201ENST00000480211 153 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC013828.1-201ENST00000481845 158 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 AC092470.1-201ENST00000546187 132 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 ZNF321P-202ENST00000550843 495 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.12□□□□□ -1.91
CDX4O14627 SNORD39.3-201ENST00000584451 71 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC091057.2-201ENST00000602594 792 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC136601.2-201ENST00000604356 474 ntBASIC3.12□□□□□ -1.91
CDX4O14627 HMGN2P28-201ENST00000606102 262 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.12□□□□□ -1.91
CDX4O14627 AC093783.1-201ENST00000612976 329 ntBASIC3.12□□□□□ -1.91
CDX4O14627 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 AL158163.2-201ENST00000619110 700 ntBASIC3.12□□□□□ -1.91
CDX4O14627 AL359715.5-201ENST00000623431 443 ntBASIC3.12□□□□□ -1.91
CDX4O14627 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.12□□□□□ -1.91
CDX4O14627 MKKS-204ENST00000639674 192 ntBASIC3.12□□□□□ -1.91
CDX4O14627 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDX4O14627 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDX4O14627 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDX4O14627 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDX4O14627 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.12□□□□□ -1.91
CDX4O14627 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CDX4O14627 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX4O14627 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.11□□□□□ -1.91
CDX4O14627 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDX4O14627 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX4O14627 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX4O14627 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX4O14627 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
CDX4O14627 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX4O14627 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CDX4O14627 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDX4O14627 Y_RNA.25-201ENST00000362528 102 ntBASIC3.11□□□□□ -1.91
CDX4O14627 RNU4-92P-201ENST00000363783 136 ntBASIC3.11□□□□□ -1.91
CDX4O14627 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
CDX4O14627 MIR506-201ENST00000384998 124 ntBASIC3.11□□□□□ -1.91
CDX4O14627 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDX4O14627 AL355379.1-201ENST00000405542 640 ntBASIC3.11□□□□□ -1.91
CDX4O14627 RPL23AP47-201ENST00000408017 460 ntBASIC3.11□□□□□ -1.91
CDX4O14627 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.11□□□□□ -1.91
CDX4O14627 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
CDX4O14627 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.11□□□□□ -1.91
CDX4O14627 AL139132.1-201ENST00000431587 344 ntBASIC3.11□□□□□ -1.91
CDX4O14627 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX4O14627 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX4O14627 AL590399.6-201ENST00000446396 307 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms