Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.42□□□□□ -2.02
UBFD1O14562 AC074029.1-201ENST00000552531 1044 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AL442163.2-201ENST00000553912 710 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AC090695.1-201ENST00000561269 1222 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AC008687.2-201ENST00000597865 520 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AC010620.2-201ENST00000600135 313 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AC018618.2-201ENST00000604770 446 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AL137847.3-201ENST00000611521 109 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 CYP3A51P-201ENST00000633513 256 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 AL359693.1-201ENST00000614959 2407 ntBASIC2.42□□□□□ -2.02
UBFD1O14562 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.42□□□□□ -2.02
UBFD1O14562 AL359893.1-201ENST00000447628 1580 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
UBFD1O14562 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UBFD1O14562 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
UBFD1O14562 RNVU1-3-201ENST00000364313 161 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC092638.1-201ENST00000411966 1275 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC004865.1-201ENST00000442276 1003 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 RPL23AP15-201ENST00000450202 459 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC233982.1-201ENST00000451247 436 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AL109933.2-201ENST00000452651 260 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 SNORD109B-201ENST00000458961 67 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 SNORD109A-201ENST00000459128 67 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.41□□□□□ -2.02
UBFD1O14562 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.41□□□□□ -2.02
UBFD1O14562 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.41□□□□□ -2.02
UBFD1O14562 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.41□□□□□ -2.02
UBFD1O14562 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 SNORA31.15-201ENST00000516771 132 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 RNU6-711P-201ENST00000517255 106 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.41□□□□□ -2.02
UBFD1O14562 AC104115.2-201ENST00000523026 687 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.41□□□□□ -2.02
UBFD1O14562 AP003717.3-201ENST00000544832 1180 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.41□□□□□ -2.02
UBFD1O14562 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.41□□□□□ -2.02
UBFD1O14562 MIR3945-201ENST00000581853 98 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.41□□□□□ -2.02
UBFD1O14562 DUXAP4-201ENST00000603046 613 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 AP000676.4-201ENST00000624659 623 ntBASIC2.41□□□□□ -2.02
UBFD1O14562 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.41□□□□□ -2.02
UBFD1O14562 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
UBFD1O14562 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
UBFD1O14562 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.4□□□□□ -2.02
UBFD1O14562 AC069528.2-201ENST00000624849 1991 ntBASIC2.4□□□□□ -2.02
UBFD1O14562 AL512646.1-201ENST00000269395 1077 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 RNU6-859P-201ENST00000362728 107 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
UBFD1O14562 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.4□□□□□ -2.03
UBFD1O14562 ATG3P1-201ENST00000419507 911 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 RPL21P66-201ENST00000426566 466 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 ARL5AP4-201ENST00000430731 512 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AC098826.1-201ENST00000433943 471 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.4□□□□□ -2.03
UBFD1O14562 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.4□□□□□ -2.03
UBFD1O14562 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.4□□□□□ -2.03
UBFD1O14562 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.4□□□□□ -2.03
UBFD1O14562 AC068135.1-201ENST00000446164 246 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AC027673.1-201ENST00000456245 405 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AC126389.1-201ENST00000477436 290 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 RPL21P131-201ENST00000497298 483 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AIG1P1-201ENST00000503376 148 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
UBFD1O14562 RN7SKP96-201ENST00000516948 297 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AC025881.1-201ENST00000518851 512 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
UBFD1O14562 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.4□□□□□ -2.03
UBFD1O14562 EIF5A2P1-201ENST00000564027 460 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.4□□□□□ -2.03
UBFD1O14562 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 AL645944.1-201ENST00000603857 493 ntBASIC2.4□□□□□ -2.03
UBFD1O14562 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.4□□□□□ -2.03
UBFD1O14562 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
UBFD1O14562 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
UBFD1O14562 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
UBFD1O14562 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
UBFD1O14562 RNU6-335P-201ENST00000364563 113 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 RSL24D1P4-201ENST00000400938 484 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AL139039.1-201ENST00000401900 692 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AL589655.1-201ENST00000405398 482 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC073264.1-201ENST00000411508 416 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AL158825.1-201ENST00000414735 521 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.39□□□□□ -2.03
UBFD1O14562 HMGB1P22-201ENST00000505315 124 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.39□□□□□ -2.03
UBFD1O14562 AC006445.2-201ENST00000510061 472 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.39□□□□□ -2.03
UBFD1O14562 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.39□□□□□ -2.03
UBFD1O14562 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 RNU6-1073P-201ENST00000517182 106 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.39□□□□□ -2.03
UBFD1O14562 CIR1P1-201ENST00000524055 1133 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.39□□□□□ -2.03
UBFD1O14562 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms